Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01772

Experiment: PYE with Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Doxycycline hyclate 0.0001 mg/ml
1,898,039	+				-0.9
1,898,047	-				+4.1
1,898,087	+				+0.8
1,898,095	-				-0.5
1,898,113	-				+1.5
1,898,851	+		CCNA_01771	0.67	+1.5
1,898,949	+				-0.8
1,898,950	+				-0.1
1,898,961	+				-0.9
1,898,984	+				-0.5
1,898,987	-				-0.5
1,899,013	+				+1.3
1,899,030	+				+0.4
1,899,035	-				-0.4
1,899,171	+		CCNA_01772	0.36	+0.7
1,899,179	-		CCNA_01772	0.38	+1.3
1,899,179	-		CCNA_01772	0.38	-0.8
1,899,202	+		CCNA_01772	0.44	-0.3
1,899,220	-		CCNA_01772	0.49	+0.0
1,899,269	+		CCNA_01772	0.62	-2.1
1,899,274	+		CCNA_01772	0.63	+0.0
1,899,274	+		CCNA_01772	0.63	-0.1
1,899,282	-		CCNA_01772	0.65	-1.0
1,899,282	-		CCNA_01772	0.65	+0.0
1,899,282	-		CCNA_01772	0.65	-0.2
1,899,284	+		CCNA_01772	0.66	+0.8
1,899,292	-		CCNA_01772	0.68	-0.7
1,899,292	-		CCNA_01772	0.68	-0.3
1,899,329	-		CCNA_01772	0.78	-0.4
1,899,387	-				-0.1
1,899,387	-				+0.8
1,899,407	+				+0.1
1,899,407	+				+2.1
1,899,412	+				-1.3
1,899,415	-				-0.9
1,899,415	-				+1.7
1,899,415	-				+0.5
1,899,420	-				-0.2
1,899,420	-				-1.4
1,899,420	-				-2.1
1,899,525	-		CCNA_01773	0.19	-0.9
1,899,563	+		CCNA_01773	0.25	+1.0
1,899,563	+		CCNA_01773	0.25	-0.2
1,899,571	-		CCNA_01773	0.26	-0.3
1,899,616	-		CCNA_01773	0.33	+0.2
1,899,619	+		CCNA_01773	0.34	-0.1
1,899,627	-		CCNA_01773	0.35	-0.3
1,899,634	+		CCNA_01773	0.36	-2.0
1,899,641	-		CCNA_01773	0.38	-1.4
1,899,711	+		CCNA_01773	0.49	+0.0
1,899,729	+		CCNA_01773	0.52	+1.4
1,899,785	-		CCNA_01773	0.61	+0.1
1,899,819	+		CCNA_01773	0.66	+1.3
1,899,835	-		CCNA_01773	0.69	-1.2
1,899,840	-		CCNA_01773	0.70	-0.5
1,899,850	-		CCNA_01773	0.71	+1.0
1,899,850	-		CCNA_01773	0.71	+1.7
1,899,891	+		CCNA_01773	0.78	+0.2
1,899,891	+		CCNA_01773	0.78	-0.5
1,899,925	+		CCNA_01773	0.83	-0.5
1,899,936	+		CCNA_01773	0.85	+0.0
1,899,943	-		CCNA_01773	0.86	+0.7
1,899,953	-				+2.1
1,900,003	+				+1.3
1,900,031	+				-0.5
1,900,096	-				-1.5
1,900,115	+				+1.5
1,900,133	-				-0.4
1,900,277	+		CCNA_01774	0.30	-0.0
1,900,352	+		CCNA_01774	0.42	+0.8
1,900,371	+		CCNA_01774	0.46	+1.1