Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01637

Experiment: PYE with Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Doxycycline hyclate 0.0001 mg/ml
1,754,884	-		CCNA_01636	0.42	+0.5
1,754,885	+		CCNA_01636	0.42	+0.1
1,754,907	+		CCNA_01636	0.43	-0.0
1,754,915	-		CCNA_01636	0.44	-0.7
1,754,915	-		CCNA_01636	0.44	+0.0
1,754,954	+		CCNA_01636	0.46	-2.0
1,754,988	+		CCNA_01636	0.49	-0.7
1,755,007	+		CCNA_01636	0.50	-0.1
1,755,032	+		CCNA_01636	0.51	-1.0
1,755,040	-		CCNA_01636	0.52	+1.9
1,755,066	-		CCNA_01636	0.53	+1.3
1,755,066	-		CCNA_01636	0.53	+0.9
1,755,066	-		CCNA_01636	0.53	+0.6
1,755,140	+		CCNA_01636	0.58	+0.8
1,755,157	+		CCNA_01636	0.59	+1.2
1,755,183	+		CCNA_01636	0.61	+0.3
1,755,193	+		CCNA_01636	0.61	+0.6
1,755,198	+		CCNA_01636	0.62	+0.2
1,755,198	+		CCNA_01636	0.62	+1.0
1,755,198	+		CCNA_01636	0.62	+0.4
1,755,198	+		CCNA_01636	0.62	-0.6
1,755,198	+		CCNA_01636	0.62	-1.4
1,755,201	-		CCNA_01636	0.62	-1.5
1,755,201	-		CCNA_01636	0.62	-0.8
1,755,206	-		CCNA_01636	0.62	-1.2
1,755,206	-		CCNA_01636	0.62	+2.3
1,755,206	-		CCNA_01636	0.62	-0.8
1,755,221	+		CCNA_01636	0.63	+1.3
1,755,264	+		CCNA_01636	0.66	+1.3
1,755,294	+		CCNA_01636	0.68	-0.6
1,755,300	+		CCNA_01636	0.68	+1.0
1,755,324	+		CCNA_01636	0.70	-0.1
1,755,346	+		CCNA_01636	0.71	+0.2
1,755,359	+		CCNA_01636	0.72	+2.1
1,755,369	+		CCNA_01636	0.73	+1.2
1,755,383	+		CCNA_01636	0.73	-1.9
1,755,390	+		CCNA_01636	0.74	+0.1
1,755,398	-		CCNA_01636	0.74	+0.4
1,755,489	+		CCNA_01636	0.80	+1.9
1,755,492	-		CCNA_01636	0.80	+0.7
1,755,492	-		CCNA_01636	0.80	+0.5
1,755,525	+		CCNA_01636	0.82	+0.6
1,755,525	+		CCNA_01636	0.82	-0.3
1,755,533	-		CCNA_01636	0.83	+0.2
1,755,553	-		CCNA_01636	0.84	-2.3
1,755,553	-		CCNA_01636	0.84	-1.4
1,755,562	+		CCNA_01636	0.85	-0.5
1,755,567	+		CCNA_01636	0.85	+0.4
1,755,570	-		CCNA_01636	0.85	-1.5
1,755,580	-		CCNA_01636	0.86	-3.6
1,755,589	+		CCNA_01636	0.86	+0.8
1,755,597	-		CCNA_01636	0.87	+1.6
1,755,662	+				+0.0
1,755,662	+				+0.8
1,755,686	-				+0.9
1,755,713	-				-1.8
1,755,720	-				-2.0
1,755,756	+				+1.1
1,755,783	+				+1.0
1,755,793	+				+1.2
1,755,793	+				+1.1
1,755,793	+				+1.6
1,755,798	+				+0.4
1,755,801	-				+0.7
1,755,837	-				-0.1
1,758,190	+				+0.6
1,758,198	-				+0.1
1,758,234	+				-2.7
1,758,234	+				-0.7
1,758,234	+				-1.9
1,758,234	+				-1.2
1,758,242	-				+0.0
1,758,242	-				+1.3
1,758,293	+		CCNA_01638	0.11	-1.1
1,758,298	+		CCNA_01638	0.11	-1.8
1,758,335	+		CCNA_01638	0.14	-1.3
1,758,367	+		CCNA_01638	0.16	-0.4
1,758,568	+		CCNA_01638	0.31	-2.7
1,758,650	+		CCNA_01638	0.37	-1.4
1,758,667	+		CCNA_01638	0.38	-1.3
1,758,714	+		CCNA_01638	0.41	-1.6
1,758,791	+		CCNA_01638	0.47	-1.0
1,758,816	+		CCNA_01638	0.49	+0.5
1,758,841	+		CCNA_01638	0.50	+1.3
1,758,841	+		CCNA_01638	0.50	-1.8
1,758,948	+		CCNA_01638	0.58	-3.1
1,758,948	+		CCNA_01638	0.58	-2.0
1,759,030	+		CCNA_01638	0.64	-1.9
1,759,107	+		CCNA_01638	0.69	-0.1