Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01432

Experiment: PYE with Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Doxycycline hyclate 0.0001 mg/ml
1,547,236	+		CCNA_01431	0.87	-0.8
1,547,343	-				+2.9
1,547,353	+				+0.6
1,547,353	+				+0.6
1,547,353	+				+1.2
1,547,355	+				+0.9
1,547,355	+				+1.6
1,547,363	-				-2.7
1,547,363	-				-1.0
1,547,363	-				-0.5
1,548,374	+				+0.4
1,548,382	-				+0.7
1,548,382	-				-0.2
1,548,387	-				-0.9
1,548,387	-				-2.7
1,548,399	-				+1.9
1,548,412	+				+1.3
1,548,412	+				+1.2
1,548,471	+				+0.3
1,548,479	-				+0.0
1,548,518	-				-1.6
1,548,570	+				+2.0
1,548,575	+				+1.9
1,548,575	+				+1.4
1,548,575	+				+1.7
1,548,575	+				+1.6
1,548,575	+				+1.4
1,548,575	+				+1.1
1,548,583	-				+0.4
1,548,583	-				+0.4
1,548,585	+				+2.3
1,548,595	+		CCNA_01433	0.11	+1.8
1,548,608	+		CCNA_01433	0.15	+2.3
1,548,629	+		CCNA_01433	0.22	+2.2
1,548,639	+		CCNA_01433	0.25	+3.9
1,548,660	+		CCNA_01433	0.32	+3.4
1,548,660	+		CCNA_01433	0.32	+2.5
1,548,660	+		CCNA_01433	0.32	+2.3
1,548,668	-		CCNA_01433	0.35	+0.7
1,548,668	-		CCNA_01433	0.35	+0.2
1,548,668	-		CCNA_01433	0.35	-0.0
1,548,689	-		CCNA_01433	0.42	-1.4
1,548,699	+		CCNA_01433	0.45	+1.4
1,548,699	-		CCNA_01433	0.45	+2.3
1,548,888	+				+2.1
1,549,037	+		CCNA_01434	0.37	+1.3
1,549,037	+		CCNA_01434	0.37	+0.4
1,549,058	+		CCNA_01434	0.42	+1.1
1,549,061	-		CCNA_01434	0.43	-0.3
1,549,068	+		CCNA_01434	0.45	+1.0
1,549,068	+		CCNA_01434	0.45	+0.4
1,549,068	+		CCNA_01434	0.45	+1.6
1,549,076	-		CCNA_01434	0.46	-1.1
1,549,076	-		CCNA_01434	0.46	+0.9
1,549,076	-		CCNA_01434	0.46	+0.3
1,549,089	-		CCNA_01434	0.50	-0.4
1,549,175	+		CCNA_01434	0.70	-1.0
1,549,183	-		CCNA_01434	0.72	-1.3
1,549,254	+		CCNA_01434	0.88	+0.6
1,549,262	-				-0.1
1,549,286	+				+0.9
1,549,299	+				-0.3
1,549,309	+				+1.8