Experiment: Tetracycline 0.00005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3604 and Ac3H11_3605 are separated by 348 nucleotides Ac3H11_3605 and Ac3H11_3606 are separated by 152 nucleotides Ac3H11_3606 and Ac3H11_3607 overlap by 23 nucleotides
Ac3H11_3604 - Probable sensor histidine kinase protein (EC 2.7.3.-), at 156,543 to 159,020
_3604
Ac3H11_3605 - FIG00349159: hypothetical protein, at 159,369 to 159,539
_3605
Ac3H11_3606 - Mlr1171 protein, at 159,692 to 160,294
_3606
Ac3H11_3607 - Metallo-beta-lactamase superfamily protein, at 160,272 to 161,240
_3607
Position (kb) 159
160
161 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 158.922 kb on + strand at 158.922 kb on + strand at 158.922 kb on + strand at 158.923 kb on - strand at 158.923 kb on - strand at 158.923 kb on - strand at 158.923 kb on - strand at 158.923 kb on - strand at 158.923 kb on - strand at 159.018 kb on + strand at 159.134 kb on + strand at 159.177 kb on + strand at 159.178 kb on - strand at 159.279 kb on + strand at 159.279 kb on + strand at 159.279 kb on + strand at 159.279 kb on + strand at 159.279 kb on + strand at 159.472 kb on + strand, within Ac3H11_3605 at 159.488 kb on + strand, within Ac3H11_3605 at 159.542 kb on + strand at 159.542 kb on + strand at 159.542 kb on + strand at 159.542 kb on + strand at 159.542 kb on + strand at 159.542 kb on + strand at 159.542 kb on + strand at 159.543 kb on - strand at 159.543 kb on - strand at 159.543 kb on - strand at 159.543 kb on - strand at 159.543 kb on - strand at 159.543 kb on - strand at 159.543 kb on - strand at 159.543 kb on - strand at 159.543 kb on - strand at 159.576 kb on + strand at 159.995 kb on + strand, within Ac3H11_3606 at 159.995 kb on + strand, within Ac3H11_3606 at 159.996 kb on - strand, within Ac3H11_3606 at 160.492 kb on + strand, within Ac3H11_3607 at 160.492 kb on + strand, within Ac3H11_3607 at 160.493 kb on - strand, within Ac3H11_3607 at 160.493 kb on - strand, within Ac3H11_3607 at 160.493 kb on - strand, within Ac3H11_3607 at 160.552 kb on + strand, within Ac3H11_3607 at 160.802 kb on - strand, within Ac3H11_3607 at 160.954 kb on + strand, within Ac3H11_3607 at 160.955 kb on - strand, within Ac3H11_3607 at 160.969 kb on + strand, within Ac3H11_3607 at 160.969 kb on + strand, within Ac3H11_3607 at 160.970 kb on - strand, within Ac3H11_3607 at 160.970 kb on - strand, within Ac3H11_3607 at 161.191 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Tetracycline 0.00005 mg/ml remove 158,922 + -1.0 158,922 + -1.1 158,922 + +0.7 158,923 - -0.7 158,923 - -0.6 158,923 - -0.5 158,923 - -0.1 158,923 - -2.2 158,923 - +0.5 159,018 + +0.4 159,134 + +0.1 159,177 + -0.3 159,178 - -0.4 159,279 + -0.8 159,279 + -0.0 159,279 + +0.1 159,279 + +0.7 159,279 + -0.1 159,472 + Ac3H11_3605 0.60 +0.4 159,488 + Ac3H11_3605 0.70 +1.4 159,542 + -0.9 159,542 + -0.6 159,542 + -3.4 159,542 + +0.1 159,542 + +0.0 159,542 + +0.3 159,542 + +0.2 159,543 - +2.5 159,543 - -0.9 159,543 - -0.4 159,543 - -0.0 159,543 - -0.2 159,543 - -0.5 159,543 - +0.1 159,543 - +0.5 159,543 - -0.3 159,576 + +1.3 159,995 + Ac3H11_3606 0.50 +0.3 159,995 + Ac3H11_3606 0.50 +0.3 159,996 - Ac3H11_3606 0.50 +0.6 160,492 + Ac3H11_3607 0.23 -0.8 160,492 + Ac3H11_3607 0.23 +0.5 160,493 - Ac3H11_3607 0.23 +0.9 160,493 - Ac3H11_3607 0.23 +0.6 160,493 - Ac3H11_3607 0.23 +0.4 160,552 + Ac3H11_3607 0.29 +0.3 160,802 - Ac3H11_3607 0.55 -0.3 160,954 + Ac3H11_3607 0.70 -1.7 160,955 - Ac3H11_3607 0.70 -0.5 160,969 + Ac3H11_3607 0.72 -0.0 160,969 + Ac3H11_3607 0.72 -0.4 160,970 - Ac3H11_3607 0.72 -1.5 160,970 - Ac3H11_3607 0.72 +0.2 161,191 + -0.4
Or see this region's nucleotide sequence