Experiment: L-Histidine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS28125 and AZOBR_RS28130 are separated by 302 nucleotides AZOBR_RS28130 and AZOBR_RS28135 overlap by 1 nucleotides AZOBR_RS28135 and AZOBR_RS28140 are separated by 97 nucleotides
AZOBR_RS28125: AZOBR_RS28125 - 3-carboxy-cis cis-muconate cycloisomerase, at 481,450 to 482,811
_RS28125
AZOBR_RS28130: AZOBR_RS28130 - pyridine nucleotide-disulfide oxidoreductase, at 483,114 to 484,367
_RS28130
AZOBR_RS28135: AZOBR_RS28135 - reductase, at 484,367 to 484,690
_RS28135
AZOBR_RS28140: AZOBR_RS28140 - cytochrome P450, at 484,788 to 485,951
_RS28140
Position (kb) 483
484
485 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 482.251 kb on + strand, within AZOBR_RS28125 at 482.620 kb on + strand, within AZOBR_RS28125 at 482.743 kb on + strand at 482.743 kb on + strand at 482.743 kb on + strand at 483.188 kb on + strand at 483.189 kb on - strand at 483.215 kb on + strand at 483.215 kb on + strand at 483.216 kb on - strand at 483.216 kb on - strand at 483.216 kb on - strand at 483.271 kb on + strand, within AZOBR_RS28130 at 483.271 kb on + strand, within AZOBR_RS28130 at 483.271 kb on + strand, within AZOBR_RS28130 at 483.272 kb on - strand, within AZOBR_RS28130 at 483.365 kb on - strand, within AZOBR_RS28130 at 483.365 kb on - strand, within AZOBR_RS28130 at 483.766 kb on + strand, within AZOBR_RS28130 at 483.767 kb on - strand, within AZOBR_RS28130 at 483.880 kb on + strand, within AZOBR_RS28130 at 483.881 kb on - strand, within AZOBR_RS28130 at 484.220 kb on - strand, within AZOBR_RS28130 at 484.220 kb on - strand, within AZOBR_RS28130 at 484.536 kb on + strand, within AZOBR_RS28135 at 484.537 kb on - strand, within AZOBR_RS28135 at 484.537 kb on - strand, within AZOBR_RS28135 at 484.537 kb on - strand, within AZOBR_RS28135 at 484.537 kb on - strand, within AZOBR_RS28135 at 484.537 kb on - strand, within AZOBR_RS28135 at 484.999 kb on + strand, within AZOBR_RS28140 at 484.999 kb on + strand, within AZOBR_RS28140
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (N) remove 482,251 + AZOBR_RS28125 0.59 +2.5 482,620 + AZOBR_RS28125 0.86 +1.0 482,743 + -2.3 482,743 + +2.4 482,743 + -2.5 483,188 + +1.2 483,189 - +0.2 483,215 + -0.3 483,215 + +2.2 483,216 - -0.1 483,216 - -0.6 483,216 - +0.6 483,271 + AZOBR_RS28130 0.13 -0.3 483,271 + AZOBR_RS28130 0.13 -0.1 483,271 + AZOBR_RS28130 0.13 -0.2 483,272 - AZOBR_RS28130 0.13 -1.7 483,365 - AZOBR_RS28130 0.20 +0.8 483,365 - AZOBR_RS28130 0.20 -1.2 483,766 + AZOBR_RS28130 0.52 +0.0 483,767 - AZOBR_RS28130 0.52 -1.0 483,880 + AZOBR_RS28130 0.61 +0.5 483,881 - AZOBR_RS28130 0.61 -3.4 484,220 - AZOBR_RS28130 0.88 +0.4 484,220 - AZOBR_RS28130 0.88 -0.1 484,536 + AZOBR_RS28135 0.52 +0.1 484,537 - AZOBR_RS28135 0.52 -0.2 484,537 - AZOBR_RS28135 0.52 -0.7 484,537 - AZOBR_RS28135 0.52 +0.6 484,537 - AZOBR_RS28135 0.52 +0.9 484,537 - AZOBR_RS28135 0.52 -0.6 484,999 + AZOBR_RS28140 0.18 -2.3 484,999 + AZOBR_RS28140 0.18 -0.2
Or see this region's nucleotide sequence