Experiment: L-Histidine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS27700 and AZOBR_RS27705 are separated by 4 nucleotides AZOBR_RS27705 and AZOBR_RS27710 are separated by 456 nucleotides
AZOBR_RS27700: AZOBR_RS27700 - hypothetical protein, at 376,565 to 377,827
_RS27700
AZOBR_RS27705: AZOBR_RS27705 - hypothetical protein, at 377,832 to 380,573
_RS27705
AZOBR_RS27710: AZOBR_RS27710 - hypothetical protein, at 381,030 to 381,809
_RS27710
Position (kb) 377
378
379
380
381 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 376.876 kb on + strand, within AZOBR_RS27700 at 376.876 kb on + strand, within AZOBR_RS27700 at 376.929 kb on + strand, within AZOBR_RS27700 at 376.970 kb on + strand, within AZOBR_RS27700 at 376.971 kb on - strand, within AZOBR_RS27700 at 376.971 kb on - strand, within AZOBR_RS27700 at 376.971 kb on - strand, within AZOBR_RS27700 at 376.971 kb on - strand, within AZOBR_RS27700 at 376.986 kb on + strand, within AZOBR_RS27700 at 376.987 kb on - strand, within AZOBR_RS27700 at 377.064 kb on + strand, within AZOBR_RS27700 at 377.065 kb on - strand, within AZOBR_RS27700 at 377.265 kb on + strand, within AZOBR_RS27700 at 377.266 kb on - strand, within AZOBR_RS27700 at 377.266 kb on - strand, within AZOBR_RS27700 at 377.266 kb on - strand, within AZOBR_RS27700 at 377.373 kb on + strand, within AZOBR_RS27700 at 377.374 kb on - strand, within AZOBR_RS27700 at 377.432 kb on - strand, within AZOBR_RS27700 at 377.470 kb on + strand, within AZOBR_RS27700 at 377.475 kb on + strand, within AZOBR_RS27700 at 377.475 kb on + strand, within AZOBR_RS27700 at 377.476 kb on - strand, within AZOBR_RS27700 at 377.520 kb on + strand, within AZOBR_RS27700 at 377.520 kb on + strand, within AZOBR_RS27700 at 377.520 kb on + strand, within AZOBR_RS27700 at 377.520 kb on + strand, within AZOBR_RS27700 at 377.520 kb on + strand, within AZOBR_RS27700 at 377.520 kb on + strand, within AZOBR_RS27700 at 377.521 kb on - strand, within AZOBR_RS27700 at 377.589 kb on + strand, within AZOBR_RS27700 at 377.589 kb on + strand, within AZOBR_RS27700 at 377.801 kb on - strand at 378.196 kb on + strand, within AZOBR_RS27705 at 378.196 kb on + strand, within AZOBR_RS27705 at 378.337 kb on + strand, within AZOBR_RS27705 at 378.364 kb on + strand, within AZOBR_RS27705 at 379.127 kb on - strand, within AZOBR_RS27705 at 379.394 kb on - strand, within AZOBR_RS27705 at 379.394 kb on - strand, within AZOBR_RS27705 at 379.693 kb on + strand, within AZOBR_RS27705 at 380.218 kb on + strand, within AZOBR_RS27705 at 380.219 kb on - strand, within AZOBR_RS27705 at 380.219 kb on - strand, within AZOBR_RS27705 at 380.219 kb on - strand, within AZOBR_RS27705 at 380.281 kb on + strand, within AZOBR_RS27705 at 380.282 kb on - strand, within AZOBR_RS27705 at 380.282 kb on - strand, within AZOBR_RS27705 at 380.408 kb on - strand at 380.524 kb on + strand at 380.525 kb on - strand at 380.669 kb on + strand at 380.814 kb on - strand at 380.814 kb on - strand at 380.825 kb on + strand at 381.127 kb on + strand, within AZOBR_RS27710 at 381.286 kb on + strand, within AZOBR_RS27710 at 381.287 kb on - strand, within AZOBR_RS27710 at 381.287 kb on - strand, within AZOBR_RS27710 at 381.287 kb on - strand, within AZOBR_RS27710 at 381.484 kb on + strand, within AZOBR_RS27710 at 381.484 kb on + strand, within AZOBR_RS27710 at 381.484 kb on + strand, within AZOBR_RS27710 at 381.484 kb on + strand, within AZOBR_RS27710 at 381.485 kb on - strand, within AZOBR_RS27710 at 381.485 kb on - strand, within AZOBR_RS27710 at 381.504 kb on - strand, within AZOBR_RS27710 at 381.520 kb on + strand, within AZOBR_RS27710 at 381.520 kb on + strand, within AZOBR_RS27710 at 381.521 kb on - strand, within AZOBR_RS27710 at 381.521 kb on - strand, within AZOBR_RS27710
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (N) remove 376,876 + AZOBR_RS27700 0.25 -0.1 376,876 + AZOBR_RS27700 0.25 -1.0 376,929 + AZOBR_RS27700 0.29 +0.5 376,970 + AZOBR_RS27700 0.32 +0.3 376,971 - AZOBR_RS27700 0.32 +1.3 376,971 - AZOBR_RS27700 0.32 -3.5 376,971 - AZOBR_RS27700 0.32 +1.7 376,971 - AZOBR_RS27700 0.32 -2.1 376,986 + AZOBR_RS27700 0.33 -1.0 376,987 - AZOBR_RS27700 0.33 -0.8 377,064 + AZOBR_RS27700 0.40 +0.6 377,065 - AZOBR_RS27700 0.40 -0.1 377,265 + AZOBR_RS27700 0.55 +0.5 377,266 - AZOBR_RS27700 0.56 -1.2 377,266 - AZOBR_RS27700 0.56 +0.7 377,266 - AZOBR_RS27700 0.56 +0.2 377,373 + AZOBR_RS27700 0.64 -0.4 377,374 - AZOBR_RS27700 0.64 +2.1 377,432 - AZOBR_RS27700 0.69 +1.0 377,470 + AZOBR_RS27700 0.72 -1.7 377,475 + AZOBR_RS27700 0.72 -2.1 377,475 + AZOBR_RS27700 0.72 -0.8 377,476 - AZOBR_RS27700 0.72 -0.2 377,520 + AZOBR_RS27700 0.76 +1.3 377,520 + AZOBR_RS27700 0.76 +0.5 377,520 + AZOBR_RS27700 0.76 -1.5 377,520 + AZOBR_RS27700 0.76 -1.5 377,520 + AZOBR_RS27700 0.76 +2.0 377,520 + AZOBR_RS27700 0.76 +1.9 377,521 - AZOBR_RS27700 0.76 +2.1 377,589 + AZOBR_RS27700 0.81 +2.2 377,589 + AZOBR_RS27700 0.81 -1.6 377,801 - -0.2 378,196 + AZOBR_RS27705 0.13 +0.1 378,196 + AZOBR_RS27705 0.13 +1.0 378,337 + AZOBR_RS27705 0.18 +0.4 378,364 + AZOBR_RS27705 0.19 -0.3 379,127 - AZOBR_RS27705 0.47 -1.3 379,394 - AZOBR_RS27705 0.57 +1.1 379,394 - AZOBR_RS27705 0.57 +0.9 379,693 + AZOBR_RS27705 0.68 -0.2 380,218 + AZOBR_RS27705 0.87 -0.3 380,219 - AZOBR_RS27705 0.87 -0.4 380,219 - AZOBR_RS27705 0.87 +0.2 380,219 - AZOBR_RS27705 0.87 -0.4 380,281 + AZOBR_RS27705 0.89 +1.8 380,282 - AZOBR_RS27705 0.89 -0.3 380,282 - AZOBR_RS27705 0.89 +0.9 380,408 - -2.0 380,524 + +0.1 380,525 - -0.1 380,669 + +0.6 380,814 - -0.6 380,814 - -1.1 380,825 + -1.7 381,127 + AZOBR_RS27710 0.12 +1.0 381,286 + AZOBR_RS27710 0.33 +1.2 381,287 - AZOBR_RS27710 0.33 -0.8 381,287 - AZOBR_RS27710 0.33 +1.3 381,287 - AZOBR_RS27710 0.33 -1.5 381,484 + AZOBR_RS27710 0.58 -0.3 381,484 + AZOBR_RS27710 0.58 -1.4 381,484 + AZOBR_RS27710 0.58 -2.5 381,484 + AZOBR_RS27710 0.58 -1.0 381,485 - AZOBR_RS27710 0.58 +0.1 381,485 - AZOBR_RS27710 0.58 +0.6 381,504 - AZOBR_RS27710 0.61 -0.2 381,520 + AZOBR_RS27710 0.63 -1.1 381,520 + AZOBR_RS27710 0.63 -1.3 381,521 - AZOBR_RS27710 0.63 +0.3 381,521 - AZOBR_RS27710 0.63 +0.3
Or see this region's nucleotide sequence