Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS23370

Experiment: L-Histidine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAZOBR_RS23365 and AZOBR_RS23370 are separated by 529 nucleotidesAZOBR_RS23370 and AZOBR_RS23375 are separated by 531 nucleotides AZOBR_RS23365: AZOBR_RS23365 - iron-hydroxamate transporter ATP-binding protein, at 271,302 to 272,090 _RS23365 AZOBR_RS23370: AZOBR_RS23370 - tRNA-Trp, at 272,620 to 272,695 _RS23370 AZOBR_RS23375: AZOBR_RS23375 - hypothetical protein, at 273,227 to 273,922 _RS23375 Position (kb) 272 273Strain fitness (log2 ratio) -2 -1 0 1at 272.026 kb on - strandat 272.026 kb on - strandat 272.026 kb on - strandat 272.026 kb on - strandat 272.026 kb on - strandat 272.026 kb on - strandat 272.363 kb on - strandat 272.394 kb on - strandat 272.394 kb on - strandat 272.394 kb on - strandat 272.748 kb on + strandat 272.807 kb on - strandat 272.821 kb on - strandat 272.916 kb on + strandat 272.942 kb on - strandat 272.978 kb on - strandat 273.016 kb on - strandat 273.082 kb on + strandat 273.082 kb on + strandat 273.082 kb on + strandat 273.083 kb on - strandat 273.303 kb on - strand, within AZOBR_RS23375at 273.303 kb on - strand, within AZOBR_RS23375at 273.323 kb on + strand, within AZOBR_RS23375at 273.323 kb on + strand, within AZOBR_RS23375at 273.324 kb on - strand, within AZOBR_RS23375at 273.411 kb on - strand, within AZOBR_RS23375at 273.689 kb on + strand, within AZOBR_RS23375

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Histidine (N)
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272,026 - -1.0
272,026 - -1.6
272,026 - +0.1
272,026 - +1.1
272,026 - +0.8
272,026 - +0.4
272,363 - +0.8
272,394 - +0.3
272,394 - -0.8
272,394 - +0.8
272,748 + +0.2
272,807 - +0.8
272,821 - +0.4
272,916 + +0.1
272,942 - +0.7
272,978 - +1.1
273,016 - -2.2
273,082 + -0.1
273,082 + -0.3
273,082 + +0.1
273,083 - +1.2
273,303 - AZOBR_RS23375 0.11 +0.2
273,303 - AZOBR_RS23375 0.11 +1.2
273,323 + AZOBR_RS23375 0.14 +1.0
273,323 + AZOBR_RS23375 0.14 +0.6
273,324 - AZOBR_RS23375 0.14 +0.5
273,411 - AZOBR_RS23375 0.26 -0.4
273,689 + AZOBR_RS23375 0.66 +0.5

Or see this region's nucleotide sequence