Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS23360

Experiment: L-Histidine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAZOBR_RS23360 and AZOBR_RS23365 overlap by 4 nucleotides AZOBR_RS23360: AZOBR_RS23360 - hypothetical protein, at 270,385 to 271,305 _RS23360 AZOBR_RS23365: AZOBR_RS23365 - iron-hydroxamate transporter ATP-binding protein, at 271,302 to 272,090 _RS23365 Position (kb) 270 271 272Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 269.774 kb on + strandat 269.774 kb on + strandat 269.774 kb on + strandat 269.775 kb on - strandat 269.775 kb on - strandat 269.775 kb on - strandat 269.775 kb on - strandat 269.775 kb on - strandat 269.775 kb on - strandat 269.775 kb on - strandat 270.647 kb on - strand, within AZOBR_RS23360at 270.647 kb on - strand, within AZOBR_RS23360at 270.746 kb on - strand, within AZOBR_RS23360at 270.748 kb on + strand, within AZOBR_RS23360at 270.749 kb on - strand, within AZOBR_RS23360at 271.271 kb on - strandat 271.557 kb on + strand, within AZOBR_RS23365at 272.026 kb on - strandat 272.026 kb on - strandat 272.026 kb on - strandat 272.026 kb on - strandat 272.026 kb on - strandat 272.026 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Histidine (N)
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269,774 + -4.0
269,774 + -0.2
269,774 + +0.4
269,775 - +0.5
269,775 - +0.0
269,775 - -0.5
269,775 - -0.5
269,775 - -0.0
269,775 - -0.5
269,775 - +0.1
270,647 - AZOBR_RS23360 0.28 -0.3
270,647 - AZOBR_RS23360 0.28 -2.3
270,746 - AZOBR_RS23360 0.39 -0.4
270,748 + AZOBR_RS23360 0.39 -0.8
270,749 - AZOBR_RS23360 0.40 -0.2
271,271 - +0.2
271,557 + AZOBR_RS23365 0.32 +0.8
272,026 - -1.0
272,026 - -1.6
272,026 - +0.1
272,026 - +1.1
272,026 - +0.8
272,026 - +0.4

Or see this region's nucleotide sequence