Experiment: L-Histidine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS15095 and AZOBR_RS15100 overlap by 8 nucleotides AZOBR_RS15100 and AZOBR_RS15105 overlap by 4 nucleotides AZOBR_RS15105 and AZOBR_RS15110 overlap by 4 nucleotides AZOBR_RS15110 and AZOBR_RS15115 overlap by 4 nucleotides AZOBR_RS15115 and AZOBR_RS15120 are separated by 132 nucleotides AZOBR_RS15120 and AZOBR_RS15125 are separated by 10 nucleotides
AZOBR_RS15095: AZOBR_RS15095 - hypothetical protein, at 167,713 to 169,812
_RS15095
AZOBR_RS15100: AZOBR_RS15100 - hypothetical protein, at 169,805 to 170,389
_RS15100
AZOBR_RS15105: AZOBR_RS15105 - hypothetical protein, at 170,386 to 170,703
_RS15105
AZOBR_RS15110: AZOBR_RS15110 - hypothetical protein, at 170,700 to 171,716
_RS15110
AZOBR_RS15115: AZOBR_RS15115 - hypothetical protein, at 171,713 to 172,033
_RS15115
AZOBR_RS15120: AZOBR_RS15120 - hypothetical protein, at 172,166 to 172,573
_RS15120
AZOBR_RS15125: AZOBR_RS15125 - hypothetical protein, at 172,584 to 173,000
_RS15125
Position (kb) 170
171
172 Strain fitness (log2 ratio) -2
-1
0
1
2 at 169.727 kb on + strand at 169.728 kb on - strand at 169.728 kb on - strand at 169.807 kb on - strand at 169.833 kb on + strand at 169.833 kb on + strand at 169.833 kb on + strand at 169.834 kb on - strand at 170.157 kb on + strand, within AZOBR_RS15100 at 170.157 kb on + strand, within AZOBR_RS15100 at 170.157 kb on + strand, within AZOBR_RS15100 at 170.157 kb on + strand, within AZOBR_RS15100 at 170.158 kb on - strand, within AZOBR_RS15100 at 170.268 kb on + strand, within AZOBR_RS15100 at 170.268 kb on + strand, within AZOBR_RS15100 at 170.806 kb on + strand, within AZOBR_RS15110 at 170.806 kb on + strand, within AZOBR_RS15110 at 170.807 kb on - strand, within AZOBR_RS15110 at 170.807 kb on - strand, within AZOBR_RS15110 at 170.807 kb on - strand, within AZOBR_RS15110 at 170.872 kb on + strand, within AZOBR_RS15110 at 170.872 kb on + strand, within AZOBR_RS15110 at 170.872 kb on + strand, within AZOBR_RS15110 at 170.873 kb on - strand, within AZOBR_RS15110 at 170.873 kb on - strand, within AZOBR_RS15110 at 170.873 kb on - strand, within AZOBR_RS15110 at 170.930 kb on + strand, within AZOBR_RS15110 at 171.121 kb on + strand, within AZOBR_RS15110 at 171.122 kb on - strand, within AZOBR_RS15110 at 171.173 kb on - strand, within AZOBR_RS15110 at 171.173 kb on - strand, within AZOBR_RS15110 at 171.682 kb on + strand at 171.682 kb on + strand at 171.682 kb on + strand at 171.682 kb on + strand at 171.750 kb on + strand, within AZOBR_RS15115 at 171.750 kb on + strand, within AZOBR_RS15115 at 171.750 kb on + strand, within AZOBR_RS15115 at 171.751 kb on - strand, within AZOBR_RS15115 at 171.751 kb on - strand, within AZOBR_RS15115 at 171.751 kb on - strand, within AZOBR_RS15115 at 171.869 kb on - strand, within AZOBR_RS15115 at 171.997 kb on - strand, within AZOBR_RS15115 at 171.997 kb on - strand, within AZOBR_RS15115 at 172.531 kb on - strand, within AZOBR_RS15120 at 172.597 kb on + strand at 172.597 kb on + strand at 172.597 kb on + strand at 172.597 kb on + strand at 172.597 kb on + strand at 172.598 kb on - strand at 172.598 kb on - strand at 172.598 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (N) remove 169,727 + +1.4 169,728 - +0.6 169,728 - +1.2 169,807 - -0.5 169,833 + +1.7 169,833 + +0.7 169,833 + +1.3 169,834 - +1.0 170,157 + AZOBR_RS15100 0.60 +1.4 170,157 + AZOBR_RS15100 0.60 +1.0 170,157 + AZOBR_RS15100 0.60 +0.7 170,157 + AZOBR_RS15100 0.60 +0.3 170,158 - AZOBR_RS15100 0.60 +0.1 170,268 + AZOBR_RS15100 0.79 +1.9 170,268 + AZOBR_RS15100 0.79 +1.4 170,806 + AZOBR_RS15110 0.10 +1.4 170,806 + AZOBR_RS15110 0.10 -0.4 170,807 - AZOBR_RS15110 0.11 +1.3 170,807 - AZOBR_RS15110 0.11 +0.2 170,807 - AZOBR_RS15110 0.11 +0.2 170,872 + AZOBR_RS15110 0.17 +0.6 170,872 + AZOBR_RS15110 0.17 +1.3 170,872 + AZOBR_RS15110 0.17 +0.5 170,873 - AZOBR_RS15110 0.17 -1.1 170,873 - AZOBR_RS15110 0.17 +0.6 170,873 - AZOBR_RS15110 0.17 -2.6 170,930 + AZOBR_RS15110 0.23 -0.5 171,121 + AZOBR_RS15110 0.41 -1.7 171,122 - AZOBR_RS15110 0.41 +0.1 171,173 - AZOBR_RS15110 0.47 +0.8 171,173 - AZOBR_RS15110 0.47 +0.8 171,682 + +1.2 171,682 + +1.0 171,682 + +0.7 171,682 + +0.8 171,750 + AZOBR_RS15115 0.12 +1.2 171,750 + AZOBR_RS15115 0.12 +1.0 171,750 + AZOBR_RS15115 0.12 +0.9 171,751 - AZOBR_RS15115 0.12 +0.6 171,751 - AZOBR_RS15115 0.12 +1.8 171,751 - AZOBR_RS15115 0.12 +0.4 171,869 - AZOBR_RS15115 0.49 +1.6 171,997 - AZOBR_RS15115 0.88 +0.6 171,997 - AZOBR_RS15115 0.88 +1.1 172,531 - AZOBR_RS15120 0.89 +1.0 172,597 + +0.8 172,597 + +0.6 172,597 + +1.1 172,597 + +0.2 172,597 + +1.0 172,598 - +1.3 172,598 - +1.4 172,598 - +1.6
Or see this region's nucleotide sequence