Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2633
Experiment: MoYLS4 with Dimethyl Sulfoxide 10 %
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Dimethyl Sulfoxide 10 % |
---|---|---|---|---|---|
remove | |||||
3,326,871 | - | -0.3 | |||
3,326,883 | + | -0.2 | |||
3,326,908 | + | -0.2 | |||
3,327,038 | - | -0.5 | |||
3,327,526 | - | DvMF_2633 | 0.16 | -0.7 | |
3,327,644 | + | DvMF_2633 | 0.24 | -0.3 | |
3,327,678 | - | DvMF_2633 | 0.27 | -0.1 | |
3,327,679 | - | DvMF_2633 | 0.27 | +0.1 | |
3,327,699 | - | DvMF_2633 | 0.28 | -0.2 | |
3,327,794 | - | DvMF_2633 | 0.35 | -0.9 | |
3,327,856 | + | DvMF_2633 | 0.40 | -0.7 | |
3,327,934 | - | DvMF_2633 | 0.45 | -0.4 | |
3,328,322 | + | DvMF_2633 | 0.73 | -0.2 | |
3,328,468 | - | DvMF_2633 | 0.84 | -0.1 | |
3,328,470 | + | DvMF_2633 | 0.84 | -0.2 | |
3,328,632 | + | -0.1 | |||
3,328,634 | + | -0.1 | |||
3,328,686 | + | -0.3 | |||
3,328,784 | + | -0.2 | |||
3,328,905 | + | -0.4 | |||
3,328,927 | - | -0.1 | |||
3,329,022 | + | -0.2 | |||
3,329,037 | + | +0.4 | |||
3,329,089 | + | -0.2 | |||
3,329,095 | + | +0.2 | |||
3,329,287 | - | -1.0 | |||
3,329,389 | - | -1.2 | |||
3,329,638 | - | DvMF_2634 | 0.19 | -1.5 | |
3,329,654 | - | DvMF_2634 | 0.20 | -2.3 |
Or see this region's nucleotide sequence