Experiment: MoYLS4 with Dimethyl Sulfoxide 10 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0780 and DvMF_R0022 are separated by 374 nucleotides DvMF_R0022 and DvMF_0781 are separated by 448 nucleotides DvMF_0781 and DvMF_0782 are separated by 346 nucleotides
DvMF_0780: DvMF_0780 - response regulator receiver modulated CheB methylesterase (RefSeq), at 936,260 to 937,402
_0780
DvMF_R0022: DvMF_R0022 - tRNA-Pro (RefSeq), at 937,777 to 937,854
_R0022
DvMF_0781: DvMF_0781 - NLP/P60 protein (RefSeq), at 938,303 to 939,085
_0781
DvMF_0782: DvMF_0782 - hypothetical protein (RefSeq), at 939,432 to 939,974
_0782
Position (kb)
938
939
940 Strain fitness (log2 ratio)
-1
0
1 at 937.536 kb on + strand at 937.937 kb on + strand at 938.030 kb on + strand at 938.046 kb on + strand at 938.074 kb on - strand at 938.261 kb on - strand at 938.380 kb on + strand at 938.384 kb on - strand, within DvMF_0781 at 938.389 kb on - strand, within DvMF_0781 at 938.497 kb on + strand, within DvMF_0781 at 938.813 kb on - strand, within DvMF_0781 at 938.973 kb on + strand, within DvMF_0781 at 939.162 kb on - strand at 939.278 kb on - strand at 939.283 kb on - strand at 939.297 kb on + strand at 940.084 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Dimethyl Sulfoxide 10 % remove 937,536 + -0.2 937,937 + +0.3 938,030 + +0.2 938,046 + -0.2 938,074 - -0.1 938,261 - -0.1 938,380 + -0.7 938,384 - DvMF_0781 0.10 -0.1 938,389 - DvMF_0781 0.11 -0.5 938,497 + DvMF_0781 0.25 -0.7 938,813 - DvMF_0781 0.65 +0.3 938,973 + DvMF_0781 0.86 -0.1 939,162 - -0.1 939,278 - -0.4 939,283 - -0.3 939,297 + -0.1 940,084 + -0.4
Or see this region's nucleotide sequence