Experiment: MoYLS4 with Dimethyl Sulfoxide 10 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0249 and DvMF_0250 are separated by 52 nucleotides DvMF_0250 and DvMF_0251 are separated by 84 nucleotides
DvMF_0249: DvMF_0249 - glycosyl transferase family 9 (RefSeq), at 283,640 to 285,205
_0249
DvMF_0250: DvMF_0250 - CgeB family protein (RefSeq), at 285,258 to 287,207
_0250
DvMF_0251: DvMF_0251 - protein of unknown function DUF342 (RefSeq), at 287,292 to 288,437
_0251
Position (kb) 285
286
287
288 Strain fitness (log2 ratio) -1
0
1 at 284.328 kb on + strand, within DvMF_0249 at 284.328 kb on + strand, within DvMF_0249 at 284.338 kb on + strand, within DvMF_0249 at 284.425 kb on - strand, within DvMF_0249 at 284.512 kb on + strand, within DvMF_0249 at 284.574 kb on + strand, within DvMF_0249 at 284.634 kb on - strand, within DvMF_0249 at 284.690 kb on + strand, within DvMF_0249 at 285.200 kb on + strand at 285.200 kb on + strand at 285.328 kb on - strand at 285.592 kb on + strand, within DvMF_0250 at 285.722 kb on - strand, within DvMF_0250 at 285.897 kb on - strand, within DvMF_0250 at 285.988 kb on + strand, within DvMF_0250 at 286.102 kb on - strand, within DvMF_0250 at 286.263 kb on - strand, within DvMF_0250 at 286.658 kb on + strand, within DvMF_0250 at 286.658 kb on + strand, within DvMF_0250 at 286.676 kb on - strand, within DvMF_0250 at 286.708 kb on - strand, within DvMF_0250 at 287.101 kb on - strand at 287.712 kb on - strand, within DvMF_0251 at 287.764 kb on + strand, within DvMF_0251 at 287.772 kb on - strand, within DvMF_0251 at 287.904 kb on - strand, within DvMF_0251
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Dimethyl Sulfoxide 10 % remove 284,328 + DvMF_0249 0.44 +0.2 284,328 + DvMF_0249 0.44 +0.2 284,338 + DvMF_0249 0.45 +0.0 284,425 - DvMF_0249 0.50 -0.0 284,512 + DvMF_0249 0.56 +0.2 284,574 + DvMF_0249 0.60 +0.3 284,634 - DvMF_0249 0.63 +0.2 284,690 + DvMF_0249 0.67 -0.1 285,200 + -1.1 285,200 + -0.4 285,328 - -0.3 285,592 + DvMF_0250 0.17 +0.0 285,722 - DvMF_0250 0.24 -0.3 285,897 - DvMF_0250 0.33 -0.2 285,988 + DvMF_0250 0.37 -0.2 286,102 - DvMF_0250 0.43 -0.1 286,263 - DvMF_0250 0.52 -0.6 286,658 + DvMF_0250 0.72 -0.0 286,658 + DvMF_0250 0.72 -0.1 286,676 - DvMF_0250 0.73 -0.0 286,708 - DvMF_0250 0.74 +0.1 287,101 - +0.1 287,712 - DvMF_0251 0.37 -0.6 287,764 + DvMF_0251 0.41 -1.1 287,772 - DvMF_0251 0.42 -0.6 287,904 - DvMF_0251 0.53 -0.3
Or see this region's nucleotide sequence