Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS04075 and BPHYT_RS04080 are separated by 177 nucleotides BPHYT_RS04080 and BPHYT_RS04085 are separated by 6 nucleotides BPHYT_RS04085 and BPHYT_RS04090 are separated by 89 nucleotides
BPHYT_RS04075: BPHYT_RS04075 - hypothetical protein, at 929,825 to 930,220
_RS04075
BPHYT_RS04080: BPHYT_RS04080 - chloride channel protein, at 930,398 to 932,188
_RS04080
BPHYT_RS04085: BPHYT_RS04085 - MarR family transcriptional regulator, at 932,195 to 932,608
_RS04085
BPHYT_RS04090: BPHYT_RS04090 - CBS domain containing membrane protein, at 932,698 to 933,813
_RS04090
Position (kb) 930
931
932
933 Strain fitness (log2 ratio) -1
0
1 at 929.483 kb on - strand at 929.506 kb on + strand at 929.507 kb on - strand at 929.587 kb on - strand at 929.682 kb on + strand at 929.963 kb on + strand, within BPHYT_RS04075 at 929.978 kb on + strand, within BPHYT_RS04075 at 929.979 kb on - strand, within BPHYT_RS04075 at 930.011 kb on + strand, within BPHYT_RS04075 at 930.012 kb on - strand, within BPHYT_RS04075 at 930.013 kb on + strand, within BPHYT_RS04075 at 930.650 kb on + strand, within BPHYT_RS04080 at 930.650 kb on + strand, within BPHYT_RS04080 at 930.651 kb on - strand, within BPHYT_RS04080 at 930.651 kb on - strand, within BPHYT_RS04080 at 930.676 kb on + strand, within BPHYT_RS04080 at 930.677 kb on - strand, within BPHYT_RS04080 at 931.235 kb on + strand, within BPHYT_RS04080 at 932.662 kb on + strand at 932.735 kb on + strand at 932.819 kb on + strand, within BPHYT_RS04090 at 932.820 kb on - strand, within BPHYT_RS04090 at 933.055 kb on - strand, within BPHYT_RS04090
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 929,483 - +0.1 929,506 + +0.1 929,507 - -0.4 929,587 - -0.4 929,682 + -0.1 929,963 + BPHYT_RS04075 0.35 -0.4 929,978 + BPHYT_RS04075 0.39 -0.3 929,979 - BPHYT_RS04075 0.39 -0.3 930,011 + BPHYT_RS04075 0.47 -0.2 930,012 - BPHYT_RS04075 0.47 +0.7 930,013 + BPHYT_RS04075 0.47 -0.9 930,650 + BPHYT_RS04080 0.14 -0.2 930,650 + BPHYT_RS04080 0.14 +0.5 930,651 - BPHYT_RS04080 0.14 -0.8 930,651 - BPHYT_RS04080 0.14 -0.2 930,676 + BPHYT_RS04080 0.16 -0.0 930,677 - BPHYT_RS04080 0.16 -0.3 931,235 + BPHYT_RS04080 0.47 -0.2 932,662 + +0.1 932,735 + +0.7 932,819 + BPHYT_RS04090 0.11 -1.1 932,820 - BPHYT_RS04090 0.11 -0.2 933,055 - BPHYT_RS04090 0.32 -0.0
Or see this region's nucleotide sequence