Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_311

Experiment: Chloramphenicol 0.001 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAc3H11_310 and Ac3H11_311 are separated by 383 nucleotidesAc3H11_311 and Ac3H11_312 are separated by 93 nucleotidesAc3H11_312 and Ac3H11_313 are separated by 35 nucleotides Ac3H11_310 - Methyl-accepting chemotaxis protein I (serine chemoreceptor protein), at 131,074 to 132,654 _310 Ac3H11_311 - hypothetical protein, at 133,038 to 133,157 _311 Ac3H11_312 - DedA protein, at 133,251 to 133,964 _312 Ac3H11_313 - DNA mismatch repair protein MutL, at 134,000 to 136,054 _313 Position (kb) 133 134Strain fitness (log2 ratio) -2 -1 0 1 2 3at 132.059 kb on + strand, within Ac3H11_310at 132.116 kb on + strand, within Ac3H11_310at 132.117 kb on - strand, within Ac3H11_310at 132.117 kb on - strand, within Ac3H11_310at 132.117 kb on - strand, within Ac3H11_310at 132.117 kb on - strand, within Ac3H11_310at 132.146 kb on + strand, within Ac3H11_310at 132.146 kb on + strand, within Ac3H11_310at 132.146 kb on + strand, within Ac3H11_310at 132.146 kb on + strand, within Ac3H11_310at 132.146 kb on + strand, within Ac3H11_310at 132.146 kb on + strand, within Ac3H11_310at 132.146 kb on + strand, within Ac3H11_310at 132.146 kb on + strand, within Ac3H11_310at 132.146 kb on + strand, within Ac3H11_310at 132.146 kb on + strand, within Ac3H11_310at 132.146 kb on + strand, within Ac3H11_310at 132.146 kb on + strand, within Ac3H11_310at 132.146 kb on + strand, within Ac3H11_310at 132.146 kb on + strand, within Ac3H11_310at 132.146 kb on + strand, within Ac3H11_310at 132.147 kb on - strand, within Ac3H11_310at 132.147 kb on - strand, within Ac3H11_310at 132.147 kb on - strand, within Ac3H11_310at 132.147 kb on - strand, within Ac3H11_310at 132.147 kb on - strand, within Ac3H11_310at 132.147 kb on - strand, within Ac3H11_310at 132.147 kb on - strand, within Ac3H11_310at 132.147 kb on - strand, within Ac3H11_310at 132.147 kb on - strand, within Ac3H11_310at 132.150 kb on + strand, within Ac3H11_310at 132.150 kb on + strand, within Ac3H11_310at 132.150 kb on + strand, within Ac3H11_310at 132.150 kb on + strand, within Ac3H11_310at 132.151 kb on - strand, within Ac3H11_310at 132.151 kb on - strand, within Ac3H11_310at 132.151 kb on - strand, within Ac3H11_310at 132.151 kb on - strand, within Ac3H11_310at 132.151 kb on - strand, within Ac3H11_310at 132.151 kb on - strand, within Ac3H11_310at 132.151 kb on - strand, within Ac3H11_310at 132.248 kb on + strand, within Ac3H11_310at 132.248 kb on + strand, within Ac3H11_310at 132.317 kb on + strand, within Ac3H11_310at 132.374 kb on + strand, within Ac3H11_310at 132.374 kb on + strand, within Ac3H11_310at 132.374 kb on + strand, within Ac3H11_310at 132.374 kb on + strand, within Ac3H11_310at 132.374 kb on + strand, within Ac3H11_310at 132.374 kb on + strand, within Ac3H11_310at 132.375 kb on - strand, within Ac3H11_310at 132.375 kb on - strand, within Ac3H11_310at 132.375 kb on - strand, within Ac3H11_310at 132.375 kb on - strand, within Ac3H11_310at 132.438 kb on + strand, within Ac3H11_310at 132.438 kb on + strand, within Ac3H11_310at 132.438 kb on + strand, within Ac3H11_310at 132.438 kb on + strand, within Ac3H11_310at 132.438 kb on + strand, within Ac3H11_310at 132.439 kb on - strand, within Ac3H11_310at 132.439 kb on - strand, within Ac3H11_310at 132.439 kb on - strand, within Ac3H11_310at 132.439 kb on - strand, within Ac3H11_310at 132.439 kb on - strand, within Ac3H11_310at 132.439 kb on - strand, within Ac3H11_310at 132.439 kb on - strand, within Ac3H11_310at 132.439 kb on - strand, within Ac3H11_310at 132.439 kb on - strand, within Ac3H11_310at 132.439 kb on - strand, within Ac3H11_310at 132.439 kb on - strand, within Ac3H11_310at 132.439 kb on - strand, within Ac3H11_310at 132.439 kb on - strand, within Ac3H11_310at 132.669 kb on + strandat 132.669 kb on + strandat 132.669 kb on + strandat 132.669 kb on + strandat 132.669 kb on + strandat 132.669 kb on + strandat 132.669 kb on + strandat 132.669 kb on + strandat 132.669 kb on + strandat 132.669 kb on + strandat 132.670 kb on - strandat 132.670 kb on - strandat 132.670 kb on - strandat 132.670 kb on - strandat 132.670 kb on - strandat 132.670 kb on - strandat 132.670 kb on - strandat 132.670 kb on - strandat 132.737 kb on + strandat 132.737 kb on + strandat 132.737 kb on + strandat 132.737 kb on + strandat 132.737 kb on + strandat 132.738 kb on - strandat 132.738 kb on - strandat 132.738 kb on - strandat 132.738 kb on - strandat 132.738 kb on - strandat 132.738 kb on - strandat 132.738 kb on - strandat 132.738 kb on - strandat 132.745 kb on + strandat 132.745 kb on + strandat 132.745 kb on + strandat 132.746 kb on - strandat 132.791 kb on - strandat 132.813 kb on + strandat 132.813 kb on + strandat 132.813 kb on + strandat 132.814 kb on - strandat 132.814 kb on - strandat 132.814 kb on - strandat 132.841 kb on - strandat 132.841 kb on - strandat 132.841 kb on - strandat 132.841 kb on - strandat 132.887 kb on - strandat 132.912 kb on + strandat 132.912 kb on + strandat 132.912 kb on + strandat 132.912 kb on + strandat 132.912 kb on + strandat 132.912 kb on + strandat 132.912 kb on + strandat 132.913 kb on - strandat 132.913 kb on - strandat 132.913 kb on - strandat 132.913 kb on - strandat 132.913 kb on - strandat 132.913 kb on - strandat 132.913 kb on - strandat 132.935 kb on - strandat 133.926 kb on - strandat 133.996 kb on + strandat 133.997 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Chloramphenicol 0.001 mg/ml
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132,059 + Ac3H11_310 0.62 -0.2
132,116 + Ac3H11_310 0.66 +0.1
132,117 - Ac3H11_310 0.66 +0.1
132,117 - Ac3H11_310 0.66 +0.3
132,117 - Ac3H11_310 0.66 -0.0
132,117 - Ac3H11_310 0.66 +1.0
132,146 + Ac3H11_310 0.68 -0.2
132,146 + Ac3H11_310 0.68 -0.9
132,146 + Ac3H11_310 0.68 +0.5
132,146 + Ac3H11_310 0.68 -0.8
132,146 + Ac3H11_310 0.68 +0.8
132,146 + Ac3H11_310 0.68 +0.1
132,146 + Ac3H11_310 0.68 -0.5
132,146 + Ac3H11_310 0.68 -0.1
132,146 + Ac3H11_310 0.68 +0.9
132,146 + Ac3H11_310 0.68 +0.2
132,146 + Ac3H11_310 0.68 +1.7
132,146 + Ac3H11_310 0.68 +0.0
132,146 + Ac3H11_310 0.68 +1.4
132,146 + Ac3H11_310 0.68 -0.8
132,146 + Ac3H11_310 0.68 -0.4
132,147 - Ac3H11_310 0.68 -0.1
132,147 - Ac3H11_310 0.68 +0.1
132,147 - Ac3H11_310 0.68 +0.8
132,147 - Ac3H11_310 0.68 +0.2
132,147 - Ac3H11_310 0.68 -0.9
132,147 - Ac3H11_310 0.68 -0.5
132,147 - Ac3H11_310 0.68 -0.2
132,147 - Ac3H11_310 0.68 -0.2
132,147 - Ac3H11_310 0.68 -0.9
132,150 + Ac3H11_310 0.68 +0.1
132,150 + Ac3H11_310 0.68 +0.2
132,150 + Ac3H11_310 0.68 -1.0
132,150 + Ac3H11_310 0.68 +1.3
132,151 - Ac3H11_310 0.68 -0.4
132,151 - Ac3H11_310 0.68 +0.9
132,151 - Ac3H11_310 0.68 -0.3
132,151 - Ac3H11_310 0.68 +1.1
132,151 - Ac3H11_310 0.68 +0.2
132,151 - Ac3H11_310 0.68 +0.7
132,151 - Ac3H11_310 0.68 +0.1
132,248 + Ac3H11_310 0.74 +1.5
132,248 + Ac3H11_310 0.74 +0.4
132,317 + Ac3H11_310 0.79 +0.6
132,374 + Ac3H11_310 0.82 +1.0
132,374 + Ac3H11_310 0.82 -0.2
132,374 + Ac3H11_310 0.82 +0.3
132,374 + Ac3H11_310 0.82 -0.3
132,374 + Ac3H11_310 0.82 +0.9
132,374 + Ac3H11_310 0.82 +2.1
132,375 - Ac3H11_310 0.82 -0.2
132,375 - Ac3H11_310 0.82 -0.1
132,375 - Ac3H11_310 0.82 +0.1
132,375 - Ac3H11_310 0.82 -2.0
132,438 + Ac3H11_310 0.86 +0.4
132,438 + Ac3H11_310 0.86 -0.3
132,438 + Ac3H11_310 0.86 +1.3
132,438 + Ac3H11_310 0.86 +0.3
132,438 + Ac3H11_310 0.86 +0.9
132,439 - Ac3H11_310 0.86 +0.1
132,439 - Ac3H11_310 0.86 -0.0
132,439 - Ac3H11_310 0.86 -0.6
132,439 - Ac3H11_310 0.86 +1.0
132,439 - Ac3H11_310 0.86 +0.6
132,439 - Ac3H11_310 0.86 -0.2
132,439 - Ac3H11_310 0.86 -0.1
132,439 - Ac3H11_310 0.86 +0.0
132,439 - Ac3H11_310 0.86 -1.0
132,439 - Ac3H11_310 0.86 -1.0
132,439 - Ac3H11_310 0.86 +0.8
132,439 - Ac3H11_310 0.86 -0.3
132,439 - Ac3H11_310 0.86 -0.4
132,669 + -0.5
132,669 + -0.2
132,669 + -0.4
132,669 + +0.7
132,669 + -0.7
132,669 + -0.7
132,669 + -0.2
132,669 + +0.3
132,669 + +0.4
132,669 + -0.1
132,670 - -0.9
132,670 - -0.3
132,670 - +1.0
132,670 - -0.3
132,670 - -0.3
132,670 - -0.0
132,670 - -0.3
132,670 - -0.5
132,737 + +0.6
132,737 + +0.6
132,737 + -0.1
132,737 + -0.7
132,737 + +0.4
132,738 - -0.3
132,738 - +0.2
132,738 - +0.2
132,738 - -0.1
132,738 - -0.2
132,738 - -0.9
132,738 - -0.4
132,738 - -0.8
132,745 + -0.1
132,745 + -0.2
132,745 + -0.1
132,746 - +0.3
132,791 - +0.3
132,813 + +0.4
132,813 + +0.2
132,813 + +0.1
132,814 - -0.4
132,814 - -0.8
132,814 - -0.6
132,841 - -0.6
132,841 - -0.2
132,841 - +0.3
132,841 - +0.8
132,887 - -0.4
132,912 + -0.4
132,912 + -0.1
132,912 + -0.2
132,912 + -0.1
132,912 + -0.1
132,912 + +0.1
132,912 + -0.2
132,913 - +2.9
132,913 - +0.3
132,913 - -0.1
132,913 - +0.2
132,913 - +1.1
132,913 - +1.1
132,913 - -1.1
132,935 - -0.1
133,926 - -0.0
133,996 + -0.7
133,997 - +0.2

Or see this region's nucleotide sequence