Experiment: butyrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS26055 and AZOBR_RS26060 are separated by 23 nucleotides AZOBR_RS26060 and AZOBR_RS26065 are separated by 172 nucleotides
AZOBR_RS26055: AZOBR_RS26055 - ABC transporter, at 897,156 to 898,955
_RS26055
AZOBR_RS26060: AZOBR_RS26060 - hypothetical protein, at 898,979 to 901,114
_RS26060
AZOBR_RS26065: AZOBR_RS26065 - hypothetical protein, at 901,287 to 903,059
_RS26065
Position (kb) 898
899
900
901
902 Strain fitness (log2 ratio) -1
0
1 at 898.024 kb on - strand, within AZOBR_RS26055 at 898.071 kb on + strand, within AZOBR_RS26055 at 898.072 kb on - strand, within AZOBR_RS26055 at 898.072 kb on - strand, within AZOBR_RS26055 at 898.518 kb on + strand, within AZOBR_RS26055 at 898.519 kb on - strand, within AZOBR_RS26055 at 899.266 kb on - strand, within AZOBR_RS26060 at 899.266 kb on - strand, within AZOBR_RS26060 at 899.266 kb on - strand, within AZOBR_RS26060 at 899.379 kb on + strand, within AZOBR_RS26060 at 899.379 kb on + strand, within AZOBR_RS26060 at 899.556 kb on + strand, within AZOBR_RS26060 at 899.556 kb on + strand, within AZOBR_RS26060 at 899.557 kb on - strand, within AZOBR_RS26060 at 900.126 kb on + strand, within AZOBR_RS26060 at 900.126 kb on + strand, within AZOBR_RS26060 at 900.126 kb on + strand, within AZOBR_RS26060 at 900.127 kb on - strand, within AZOBR_RS26060 at 900.127 kb on - strand, within AZOBR_RS26060 at 900.127 kb on - strand, within AZOBR_RS26060 at 900.251 kb on - strand, within AZOBR_RS26060 at 900.251 kb on - strand, within AZOBR_RS26060 at 900.252 kb on + strand, within AZOBR_RS26060 at 900.252 kb on + strand, within AZOBR_RS26060 at 900.252 kb on + strand, within AZOBR_RS26060 at 900.252 kb on + strand, within AZOBR_RS26060 at 900.252 kb on + strand, within AZOBR_RS26060 at 900.253 kb on - strand, within AZOBR_RS26060 at 900.253 kb on - strand, within AZOBR_RS26060 at 900.253 kb on - strand, within AZOBR_RS26060 at 900.285 kb on + strand, within AZOBR_RS26060 at 900.286 kb on - strand, within AZOBR_RS26060 at 900.286 kb on - strand, within AZOBR_RS26060 at 900.592 kb on - strand, within AZOBR_RS26060 at 900.885 kb on + strand, within AZOBR_RS26060 at 900.885 kb on + strand, within AZOBR_RS26060 at 900.885 kb on + strand, within AZOBR_RS26060 at 900.885 kb on + strand, within AZOBR_RS26060 at 900.886 kb on - strand, within AZOBR_RS26060 at 900.886 kb on - strand, within AZOBR_RS26060 at 900.886 kb on - strand, within AZOBR_RS26060 at 901.365 kb on + strand at 901.570 kb on - strand, within AZOBR_RS26065 at 901.921 kb on - strand, within AZOBR_RS26065 at 901.921 kb on - strand, within AZOBR_RS26065
Per-strain Table
Position Strand Gene LocusTag Fraction butyrate (C) remove 898,024 - AZOBR_RS26055 0.48 +1.2 898,071 + AZOBR_RS26055 0.51 +0.7 898,072 - AZOBR_RS26055 0.51 +0.2 898,072 - AZOBR_RS26055 0.51 +0.9 898,518 + AZOBR_RS26055 0.76 +0.0 898,519 - AZOBR_RS26055 0.76 +0.5 899,266 - AZOBR_RS26060 0.13 -0.3 899,266 - AZOBR_RS26060 0.13 +0.6 899,266 - AZOBR_RS26060 0.13 +0.1 899,379 + AZOBR_RS26060 0.19 -0.2 899,379 + AZOBR_RS26060 0.19 +0.1 899,556 + AZOBR_RS26060 0.27 +0.0 899,556 + AZOBR_RS26060 0.27 +1.6 899,557 - AZOBR_RS26060 0.27 +0.3 900,126 + AZOBR_RS26060 0.54 -0.1 900,126 + AZOBR_RS26060 0.54 -0.2 900,126 + AZOBR_RS26060 0.54 +0.3 900,127 - AZOBR_RS26060 0.54 -1.0 900,127 - AZOBR_RS26060 0.54 +0.3 900,127 - AZOBR_RS26060 0.54 -0.4 900,251 - AZOBR_RS26060 0.60 -0.0 900,251 - AZOBR_RS26060 0.60 -0.9 900,252 + AZOBR_RS26060 0.60 +0.8 900,252 + AZOBR_RS26060 0.60 +0.2 900,252 + AZOBR_RS26060 0.60 +1.1 900,252 + AZOBR_RS26060 0.60 -0.3 900,252 + AZOBR_RS26060 0.60 +0.0 900,253 - AZOBR_RS26060 0.60 +0.1 900,253 - AZOBR_RS26060 0.60 +0.1 900,253 - AZOBR_RS26060 0.60 +0.8 900,285 + AZOBR_RS26060 0.61 +1.2 900,286 - AZOBR_RS26060 0.61 -0.2 900,286 - AZOBR_RS26060 0.61 +0.2 900,592 - AZOBR_RS26060 0.76 +0.5 900,885 + AZOBR_RS26060 0.89 -0.1 900,885 + AZOBR_RS26060 0.89 +1.0 900,885 + AZOBR_RS26060 0.89 -0.2 900,885 + AZOBR_RS26060 0.89 +0.3 900,886 - AZOBR_RS26060 0.89 +0.5 900,886 - AZOBR_RS26060 0.89 +0.2 900,886 - AZOBR_RS26060 0.89 +0.8 901,365 + -1.3 901,570 - AZOBR_RS26065 0.16 +0.2 901,921 - AZOBR_RS26065 0.36 +0.2 901,921 - AZOBR_RS26065 0.36 -1.7
Or see this region's nucleotide sequence