Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_14450

Experiment: Chloride 500 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_14445 and AO353_14450 overlap by 1 nucleotidesAO353_14450 and AO353_14455 are separated by 9 nucleotides AO353_14445: AO353_14445 - ABC transporter permease, at 3,202,992 to 3,204,029 _14445 AO353_14450: AO353_14450 - hemin ABC transporter ATP-binding protein, at 3,204,029 to 3,204,796 _14450 AO353_14455: AO353_14455 - iron(III) ABC transporter, at 3,204,806 to 3,205,657 _14455 Position (kb) 3204 3205Strain fitness (log2 ratio) -2 -1 0 1 2at 3203.102 kb on + strand, within AO353_14445at 3203.103 kb on - strand, within AO353_14445at 3203.198 kb on + strand, within AO353_14445at 3203.198 kb on + strand, within AO353_14445at 3203.199 kb on - strand, within AO353_14445at 3203.382 kb on + strand, within AO353_14445at 3203.382 kb on + strand, within AO353_14445at 3203.382 kb on + strand, within AO353_14445at 3203.382 kb on + strand, within AO353_14445at 3203.383 kb on - strand, within AO353_14445at 3203.383 kb on - strand, within AO353_14445at 3203.538 kb on + strand, within AO353_14445at 3203.538 kb on + strand, within AO353_14445at 3203.538 kb on + strand, within AO353_14445at 3203.538 kb on + strand, within AO353_14445at 3203.539 kb on - strand, within AO353_14445at 3203.539 kb on - strand, within AO353_14445at 3203.539 kb on - strand, within AO353_14445at 3203.539 kb on - strand, within AO353_14445at 3203.564 kb on + strand, within AO353_14445at 3203.564 kb on + strand, within AO353_14445at 3203.565 kb on - strand, within AO353_14445at 3203.607 kb on + strand, within AO353_14445at 3203.607 kb on + strand, within AO353_14445at 3203.607 kb on + strand, within AO353_14445at 3203.607 kb on + strand, within AO353_14445at 3203.607 kb on + strand, within AO353_14445at 3203.607 kb on + strand, within AO353_14445at 3203.607 kb on + strand, within AO353_14445at 3203.607 kb on + strand, within AO353_14445at 3203.607 kb on + strand, within AO353_14445at 3203.608 kb on - strand, within AO353_14445at 3203.608 kb on - strand, within AO353_14445at 3204.001 kb on + strandat 3204.001 kb on + strandat 3204.002 kb on - strandat 3204.002 kb on - strandat 3204.002 kb on - strandat 3204.002 kb on - strandat 3204.002 kb on - strandat 3204.002 kb on - strandat 3204.002 kb on - strandat 3204.002 kb on - strandat 3204.003 kb on + strandat 3204.003 kb on + strandat 3204.003 kb on + strandat 3204.003 kb on + strandat 3204.003 kb on + strandat 3204.003 kb on + strandat 3204.004 kb on - strandat 3204.004 kb on - strandat 3204.004 kb on - strandat 3204.013 kb on + strandat 3204.013 kb on + strandat 3204.014 kb on - strandat 3204.014 kb on - strandat 3204.152 kb on - strand, within AO353_14450at 3204.180 kb on + strand, within AO353_14450at 3204.180 kb on + strand, within AO353_14450at 3204.180 kb on + strand, within AO353_14450at 3204.180 kb on + strand, within AO353_14450at 3204.180 kb on + strand, within AO353_14450at 3204.180 kb on + strand, within AO353_14450at 3204.180 kb on + strand, within AO353_14450at 3204.181 kb on - strand, within AO353_14450at 3204.181 kb on - strand, within AO353_14450at 3204.181 kb on - strand, within AO353_14450at 3204.181 kb on - strand, within AO353_14450at 3204.222 kb on + strand, within AO353_14450at 3204.223 kb on - strand, within AO353_14450at 3204.223 kb on - strand, within AO353_14450at 3204.223 kb on - strand, within AO353_14450at 3204.420 kb on - strand, within AO353_14450at 3204.420 kb on - strand, within AO353_14450at 3204.420 kb on - strand, within AO353_14450at 3204.420 kb on - strand, within AO353_14450at 3204.837 kb on + strandat 3204.838 kb on - strandat 3204.908 kb on - strand, within AO353_14455at 3205.020 kb on + strand, within AO353_14455at 3205.187 kb on + strand, within AO353_14455at 3205.187 kb on + strand, within AO353_14455at 3205.188 kb on - strand, within AO353_14455at 3205.267 kb on + strand, within AO353_14455at 3205.267 kb on + strand, within AO353_14455at 3205.267 kb on + strand, within AO353_14455at 3205.268 kb on - strand, within AO353_14455at 3205.268 kb on - strand, within AO353_14455at 3205.268 kb on - strand, within AO353_14455at 3205.271 kb on + strand, within AO353_14455at 3205.271 kb on + strand, within AO353_14455at 3205.271 kb on + strand, within AO353_14455at 3205.271 kb on + strand, within AO353_14455at 3205.271 kb on + strand, within AO353_14455at 3205.271 kb on + strand, within AO353_14455at 3205.271 kb on + strand, within AO353_14455at 3205.271 kb on + strand, within AO353_14455at 3205.271 kb on + strand, within AO353_14455at 3205.271 kb on + strand, within AO353_14455at 3205.271 kb on + strand, within AO353_14455at 3205.271 kb on + strand, within AO353_14455at 3205.272 kb on - strand, within AO353_14455at 3205.272 kb on - strand, within AO353_14455at 3205.272 kb on - strand, within AO353_14455at 3205.272 kb on - strand, within AO353_14455at 3205.272 kb on - strand, within AO353_14455at 3205.272 kb on - strand, within AO353_14455at 3205.272 kb on - strand, within AO353_14455at 3205.272 kb on - strand, within AO353_14455at 3205.272 kb on - strand, within AO353_14455at 3205.272 kb on - strand, within AO353_14455at 3205.478 kb on + strand, within AO353_14455at 3205.598 kb on + strandat 3205.598 kb on + strandat 3205.598 kb on + strandat 3205.598 kb on + strandat 3205.598 kb on + strandat 3205.598 kb on + strandat 3205.599 kb on - strandat 3205.599 kb on - strandat 3205.599 kb on - strandat 3205.607 kb on + strandat 3205.634 kb on + strandat 3205.634 kb on + strandat 3205.634 kb on + strandat 3205.634 kb on + strandat 3205.634 kb on + strandat 3205.634 kb on + strandat 3205.634 kb on + strandat 3205.635 kb on - strandat 3205.635 kb on - strandat 3205.635 kb on - strandat 3205.655 kb on + strandat 3205.655 kb on + strandat 3205.671 kb on + strandat 3205.671 kb on + strandat 3205.671 kb on + strandat 3205.672 kb on - strandat 3205.672 kb on - strandat 3205.672 kb on - strandat 3205.728 kb on + strandat 3205.729 kb on - strandat 3205.729 kb on - strandat 3205.729 kb on - strandat 3205.729 kb on - strandat 3205.738 kb on + strandat 3205.739 kb on - strandat 3205.754 kb on + strandat 3205.754 kb on + strandat 3205.754 kb on + strandat 3205.754 kb on + strandat 3205.754 kb on + strandat 3205.755 kb on - strandat 3205.755 kb on - strandat 3205.755 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Chloride 500 mM
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3,203,102 + AO353_14445 0.11 -0.1
3,203,103 - AO353_14445 0.11 -1.0
3,203,198 + AO353_14445 0.20 +0.7
3,203,198 + AO353_14445 0.20 +0.2
3,203,199 - AO353_14445 0.20 +0.4
3,203,382 + AO353_14445 0.38 +0.1
3,203,382 + AO353_14445 0.38 +1.6
3,203,382 + AO353_14445 0.38 +0.5
3,203,382 + AO353_14445 0.38 -0.0
3,203,383 - AO353_14445 0.38 +0.1
3,203,383 - AO353_14445 0.38 +0.5
3,203,538 + AO353_14445 0.53 +1.0
3,203,538 + AO353_14445 0.53 +0.4
3,203,538 + AO353_14445 0.53 -0.5
3,203,538 + AO353_14445 0.53 -1.5
3,203,539 - AO353_14445 0.53 -0.5
3,203,539 - AO353_14445 0.53 +0.8
3,203,539 - AO353_14445 0.53 -1.7
3,203,539 - AO353_14445 0.53 -0.0
3,203,564 + AO353_14445 0.55 +0.1
3,203,564 + AO353_14445 0.55 -0.3
3,203,565 - AO353_14445 0.55 +0.2
3,203,607 + AO353_14445 0.59 +0.8
3,203,607 + AO353_14445 0.59 +0.5
3,203,607 + AO353_14445 0.59 -0.3
3,203,607 + AO353_14445 0.59 +0.3
3,203,607 + AO353_14445 0.59 -0.7
3,203,607 + AO353_14445 0.59 +1.6
3,203,607 + AO353_14445 0.59 -0.4
3,203,607 + AO353_14445 0.59 +1.3
3,203,607 + AO353_14445 0.59 -1.3
3,203,608 - AO353_14445 0.59 -0.8
3,203,608 - AO353_14445 0.59 +1.5
3,204,001 + +1.3
3,204,001 + -0.8
3,204,002 - -0.4
3,204,002 - -1.2
3,204,002 - +0.2
3,204,002 - +0.5
3,204,002 - -1.7
3,204,002 - -0.4
3,204,002 - +0.5
3,204,002 - +1.3
3,204,003 + +0.8
3,204,003 + +0.2
3,204,003 + -0.4
3,204,003 + +1.3
3,204,003 + +0.5
3,204,003 + +0.7
3,204,004 - +2.1
3,204,004 - +1.4
3,204,004 - -0.7
3,204,013 + -0.8
3,204,013 + -0.2
3,204,014 - +0.8
3,204,014 - +0.2
3,204,152 - AO353_14450 0.16 +0.5
3,204,180 + AO353_14450 0.20 -0.2
3,204,180 + AO353_14450 0.20 +0.5
3,204,180 + AO353_14450 0.20 +0.9
3,204,180 + AO353_14450 0.20 -0.5
3,204,180 + AO353_14450 0.20 -0.4
3,204,180 + AO353_14450 0.20 -0.4
3,204,180 + AO353_14450 0.20 -0.1
3,204,181 - AO353_14450 0.20 -0.0
3,204,181 - AO353_14450 0.20 -0.7
3,204,181 - AO353_14450 0.20 -0.7
3,204,181 - AO353_14450 0.20 +1.1
3,204,222 + AO353_14450 0.25 -0.5
3,204,223 - AO353_14450 0.25 -0.4
3,204,223 - AO353_14450 0.25 +0.3
3,204,223 - AO353_14450 0.25 -0.9
3,204,420 - AO353_14450 0.51 +0.6
3,204,420 - AO353_14450 0.51 +0.1
3,204,420 - AO353_14450 0.51 -1.5
3,204,420 - AO353_14450 0.51 -0.1
3,204,837 + +0.7
3,204,838 - +0.7
3,204,908 - AO353_14455 0.12 -0.5
3,205,020 + AO353_14455 0.25 -0.2
3,205,187 + AO353_14455 0.45 +0.4
3,205,187 + AO353_14455 0.45 -0.2
3,205,188 - AO353_14455 0.45 -0.1
3,205,267 + AO353_14455 0.54 -1.4
3,205,267 + AO353_14455 0.54 -0.2
3,205,267 + AO353_14455 0.54 +1.5
3,205,268 - AO353_14455 0.54 -0.3
3,205,268 - AO353_14455 0.54 -0.9
3,205,268 - AO353_14455 0.54 -0.0
3,205,271 + AO353_14455 0.55 +0.0
3,205,271 + AO353_14455 0.55 -1.9
3,205,271 + AO353_14455 0.55 +1.0
3,205,271 + AO353_14455 0.55 -1.0
3,205,271 + AO353_14455 0.55 -0.3
3,205,271 + AO353_14455 0.55 -1.2
3,205,271 + AO353_14455 0.55 -0.4
3,205,271 + AO353_14455 0.55 -1.4
3,205,271 + AO353_14455 0.55 -0.2
3,205,271 + AO353_14455 0.55 +0.3
3,205,271 + AO353_14455 0.55 -0.8
3,205,271 + AO353_14455 0.55 -1.9
3,205,272 - AO353_14455 0.55 -0.5
3,205,272 - AO353_14455 0.55 +0.9
3,205,272 - AO353_14455 0.55 -1.5
3,205,272 - AO353_14455 0.55 -0.5
3,205,272 - AO353_14455 0.55 -1.5
3,205,272 - AO353_14455 0.55 -0.7
3,205,272 - AO353_14455 0.55 +0.1
3,205,272 - AO353_14455 0.55 +0.2
3,205,272 - AO353_14455 0.55 +1.1
3,205,272 - AO353_14455 0.55 -1.5
3,205,478 + AO353_14455 0.79 -0.0
3,205,598 + +0.3
3,205,598 + -0.5
3,205,598 + -0.2
3,205,598 + +1.0
3,205,598 + +0.3
3,205,598 + -0.2
3,205,599 - -1.2
3,205,599 - +0.8
3,205,599 - -1.5
3,205,607 + +1.0
3,205,634 + -1.5
3,205,634 + -1.4
3,205,634 + -0.2
3,205,634 + -2.0
3,205,634 + +1.4
3,205,634 + -0.1
3,205,634 + +0.4
3,205,635 - -0.9
3,205,635 - -0.4
3,205,635 - +0.8
3,205,655 + -1.4
3,205,655 + +0.3
3,205,671 + +0.1
3,205,671 + -0.3
3,205,671 + +0.9
3,205,672 - -0.3
3,205,672 - +0.4
3,205,672 - +0.5
3,205,728 + +0.4
3,205,729 - +0.7
3,205,729 - +0.9
3,205,729 - -0.6
3,205,729 - -1.3
3,205,738 + +0.9
3,205,739 - +0.3
3,205,754 + -0.2
3,205,754 + +0.6
3,205,754 + +0.2
3,205,754 + -0.1
3,205,754 + +0.1
3,205,755 - +0.1
3,205,755 - +0.3
3,205,755 - -0.3

Or see this region's nucleotide sequence