Experiment: MoYLS4 with Fusidic 0.015625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2348 and DvMF_2349 are separated by 32 nucleotides DvMF_2349 and DvMF_2350 are separated by 217 nucleotides
DvMF_2348: DvMF_2348 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 2,958,252 to 2,959,163
_2348
DvMF_2349: DvMF_2349 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 2,959,196 to 2,960,041
_2349
DvMF_2350: DvMF_2350 - diguanylate cyclase with PAS/PAC and GAF sensors (RefSeq), at 2,960,259 to 2,963,261
_2350
Position (kb)
2959
2960
2961 Strain fitness (log2 ratio)
-1
0
1 at 2958.241 kb on + strand at 2958.563 kb on - strand, within DvMF_2348 at 2958.596 kb on - strand, within DvMF_2348 at 2958.694 kb on - strand, within DvMF_2348 at 2958.731 kb on + strand, within DvMF_2348 at 2958.759 kb on + strand, within DvMF_2348 at 2958.767 kb on - strand, within DvMF_2348 at 2958.780 kb on + strand, within DvMF_2348 at 2958.897 kb on + strand, within DvMF_2348 at 2959.121 kb on - strand at 2959.430 kb on + strand, within DvMF_2349 at 2959.438 kb on - strand, within DvMF_2349 at 2959.478 kb on - strand, within DvMF_2349 at 2959.478 kb on - strand, within DvMF_2349 at 2959.531 kb on - strand, within DvMF_2349 at 2959.907 kb on - strand, within DvMF_2349 at 2960.012 kb on - strand at 2960.034 kb on + strand at 2960.233 kb on + strand at 2960.390 kb on + strand at 2960.695 kb on + strand, within DvMF_2350 at 2960.935 kb on + strand, within DvMF_2350 at 2961.038 kb on + strand, within DvMF_2350
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Fusidic 0.015625 mg/ml remove 2,958,241 + -0.4 2,958,563 - DvMF_2348 0.34 -0.2 2,958,596 - DvMF_2348 0.38 -0.3 2,958,694 - DvMF_2348 0.48 +1.0 2,958,731 + DvMF_2348 0.53 -0.3 2,958,759 + DvMF_2348 0.56 -1.0 2,958,767 - DvMF_2348 0.56 -0.4 2,958,780 + DvMF_2348 0.58 +0.5 2,958,897 + DvMF_2348 0.71 -0.1 2,959,121 - -0.6 2,959,430 + DvMF_2349 0.28 -0.0 2,959,438 - DvMF_2349 0.29 -0.7 2,959,478 - DvMF_2349 0.33 -0.2 2,959,478 - DvMF_2349 0.33 -0.2 2,959,531 - DvMF_2349 0.40 -0.5 2,959,907 - DvMF_2349 0.84 -0.8 2,960,012 - -0.2 2,960,034 + -0.1 2,960,233 + +0.7 2,960,390 + -0.2 2,960,695 + DvMF_2350 0.15 -0.5 2,960,935 + DvMF_2350 0.23 -0.9 2,961,038 + DvMF_2350 0.26 -0.2
Or see this region's nucleotide sequence