Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1854
Experiment: MoYLS4 with Fusidic 0.015625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Fusidic 0.015625 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,267,446 | - | DvMF_1853 | 0.25 | +0.1 | |
2,267,679 | - | DvMF_1853 | 0.45 | -0.0 | |
2,267,842 | - | DvMF_1853 | 0.59 | -0.1 | |
2,267,916 | + | DvMF_1853 | 0.65 | +0.4 | |
2,267,937 | - | DvMF_1853 | 0.67 | -0.3 | |
2,268,015 | - | DvMF_1853 | 0.74 | -0.1 | |
2,268,052 | - | DvMF_1853 | 0.77 | -0.4 | |
2,268,057 | - | DvMF_1853 | 0.77 | -0.0 | |
2,268,667 | - | DvMF_1854 | 0.26 | -0.5 | |
2,268,837 | + | DvMF_1854 | 0.44 | +0.0 | |
2,268,937 | + | DvMF_1854 | 0.55 | -0.7 | |
2,269,043 | - | DvMF_1854 | 0.66 | +0.1 | |
2,269,068 | + | DvMF_1854 | 0.69 | -0.1 | |
2,269,143 | - | DvMF_1854 | 0.77 | -0.3 | |
2,269,143 | - | DvMF_1854 | 0.77 | +0.1 | |
2,269,451 | + | DvMF_1855 | 0.11 | -0.2 | |
2,269,478 | - | DvMF_1855 | 0.15 | -0.2 | |
2,269,675 | - | DvMF_1855 | 0.40 | -0.2 | |
2,269,675 | - | DvMF_1855 | 0.40 | -0.1 | |
2,269,682 | - | DvMF_1855 | 0.41 | -0.3 | |
2,269,754 | + | DvMF_1855 | 0.50 | -0.3 | |
2,269,859 | - | DvMF_1855 | 0.64 | -0.2 | |
2,269,879 | + | DvMF_1855 | 0.67 | -0.4 | |
2,269,887 | - | DvMF_1855 | 0.68 | +0.1 | |
2,270,019 | - | DvMF_1855 | 0.85 | -0.5 | |
2,270,065 | - | -0.5 | |||
2,270,065 | - | -0.3 | |||
2,270,065 | - | -0.5 | |||
2,270,065 | - | -0.1 | |||
2,270,192 | + | -0.8 |
Or see this region's nucleotide sequence