Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0371

Experiment: MoYLS4 with Fusidic 0.015625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDvMF_0370 and DvMF_0371 are separated by 334 nucleotidesDvMF_0371 and DvMF_0372 are separated by 119 nucleotidesDvMF_0372 and DvMF_0373 are separated by 37 nucleotides DvMF_0370: DvMF_0370 - outer membrane lipoprotein carrier protein LolA (RefSeq), at 435,565 to 436,266 _0370 DvMF_0371: DvMF_0371 - cell divisionFtsK/SpoIIIE (RefSeq), at 436,601 to 439,333 _0371 DvMF_0372: DvMF_0372 - translation elongation factor P (RefSeq), at 439,453 to 440,010 _0372 DvMF_0373: DvMF_0373 - 3-dehydroquinate dehydratase (RefSeq), at 440,048 to 440,527 _0373 Position (kb) 436 437 438 439 440Strain fitness (log2 ratio) -1 0 1at 436.305 kb on + strandat 436.419 kb on + strandat 436.419 kb on + strandat 436.427 kb on - strandat 439.428 kb on + strandat 439.638 kb on + strand, within DvMF_0372at 439.902 kb on + strand, within DvMF_0372

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Per-strain Table

Position Strand Gene LocusTag Fraction MoYLS4 with Fusidic 0.015625 mg/ml
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436,305 + -0.5
436,419 + -0.1
436,419 + -0.3
436,427 - -0.6
439,428 + -0.1
439,638 + DvMF_0372 0.33 -1.6
439,902 + DvMF_0372 0.80 -1.2

Or see this region's nucleotide sequence