Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5939

Experiment: Rifampicin 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.003 mg/ml
6,756,974	+				-0.4
6,756,975	-				+0.4
6,756,975	-				+0.5
6,757,040	+				+0.6
6,757,040	+				+1.0
6,757,040	+				-0.6
6,757,041	-				-1.5
6,757,041	-				-0.0
6,757,041	-				-2.0
6,757,041	-				+1.3
6,757,041	-				+0.2
6,757,041	-				+0.1
6,757,041	-				+0.1
6,757,114	+				+0.1
6,757,122	+				+0.2
6,757,123	-				-1.1
6,757,123	-				-1.6
6,757,123	-				+0.2
6,757,126	+				+1.1
6,757,126	+				+1.1
6,757,126	+				-0.6
6,757,126	+				-0.2
6,757,126	+				-1.4
6,757,126	+				-0.8
6,757,126	+				+0.0
6,757,127	-				+0.2
6,757,127	-				+4.5
6,757,435	+		Pf6N2E2_5938	0.62	+0.4
6,757,549	+		Pf6N2E2_5938	0.87	+0.8
6,757,549	+		Pf6N2E2_5938	0.87	-0.8
6,757,549	+		Pf6N2E2_5938	0.87	-1.9
6,757,549	+		Pf6N2E2_5938	0.87	-0.6
6,757,549	+		Pf6N2E2_5938	0.87	-0.9
6,757,549	+		Pf6N2E2_5938	0.87	+0.2
6,757,549	+		Pf6N2E2_5938	0.87	-1.5
6,757,550	-		Pf6N2E2_5938	0.87	+0.1
6,757,550	-		Pf6N2E2_5938	0.87	+0.9
6,757,550	-		Pf6N2E2_5938	0.87	+0.4
6,757,552	-		Pf6N2E2_5938	0.87	-1.8
6,757,792	-				+0.2
6,757,792	-				-0.2
6,757,792	-				+0.9
6,757,792	-				-0.7
6,757,862	+		Pf6N2E2_5939	0.11	-0.8
6,757,862	+		Pf6N2E2_5939	0.11	+0.7
6,757,915	+		Pf6N2E2_5939	0.13	-1.0
6,757,916	-		Pf6N2E2_5939	0.13	+1.4
6,758,136	+		Pf6N2E2_5939	0.23	+0.7
6,758,221	-		Pf6N2E2_5939	0.26	-1.4
6,758,316	+		Pf6N2E2_5939	0.31	+0.5
6,758,316	+		Pf6N2E2_5939	0.31	+0.9
6,758,317	-		Pf6N2E2_5939	0.31	+0.0
6,758,317	-		Pf6N2E2_5939	0.31	+0.5
6,758,317	-		Pf6N2E2_5939	0.31	-0.3
6,758,343	+		Pf6N2E2_5939	0.32	-1.6
6,758,344	-		Pf6N2E2_5939	0.32	-0.6
6,758,344	-		Pf6N2E2_5939	0.32	+1.2
6,758,389	+		Pf6N2E2_5939	0.34	-0.3
6,758,390	-		Pf6N2E2_5939	0.34	-0.5
6,758,670	+		Pf6N2E2_5939	0.46	+0.5
6,758,670	+		Pf6N2E2_5939	0.46	+0.2
6,758,670	+		Pf6N2E2_5939	0.46	-1.5
6,758,670	+		Pf6N2E2_5939	0.46	-1.8
6,758,670	+		Pf6N2E2_5939	0.46	-0.8
6,758,671	-		Pf6N2E2_5939	0.46	+1.6
6,758,671	-		Pf6N2E2_5939	0.46	+0.2
6,758,671	-		Pf6N2E2_5939	0.46	-1.2
6,758,673	+		Pf6N2E2_5939	0.46	+0.7
6,758,673	+		Pf6N2E2_5939	0.46	-0.7
6,758,673	+		Pf6N2E2_5939	0.46	-0.7
6,758,674	-		Pf6N2E2_5939	0.46	-0.2
6,758,971	-		Pf6N2E2_5939	0.59	+1.3
6,758,971	-		Pf6N2E2_5939	0.59	+0.5
6,758,971	-		Pf6N2E2_5939	0.59	+0.3
6,758,994	+		Pf6N2E2_5939	0.60	-0.8
6,758,994	+		Pf6N2E2_5939	0.60	-0.1
6,759,023	+		Pf6N2E2_5939	0.61	-0.0
6,759,112	+		Pf6N2E2_5939	0.65	-0.7
6,759,113	-		Pf6N2E2_5939	0.65	+0.4
6,759,113	-		Pf6N2E2_5939	0.65	+0.7
6,759,138	+		Pf6N2E2_5939	0.66	-0.0
6,759,138	+		Pf6N2E2_5939	0.66	+0.3
6,759,138	+		Pf6N2E2_5939	0.66	+0.3
6,759,138	+		Pf6N2E2_5939	0.66	+0.3
6,759,138	+		Pf6N2E2_5939	0.66	-0.7
6,759,138	+		Pf6N2E2_5939	0.66	+1.0
6,759,139	-		Pf6N2E2_5939	0.66	-0.8
6,759,139	-		Pf6N2E2_5939	0.66	-1.8
6,759,291	+		Pf6N2E2_5939	0.73	-0.3
6,759,291	+		Pf6N2E2_5939	0.73	-0.9
6,759,292	-		Pf6N2E2_5939	0.73	+1.0
6,759,292	-		Pf6N2E2_5939	0.73	-0.6
6,759,320	+		Pf6N2E2_5939	0.74	-0.5
6,759,321	-		Pf6N2E2_5939	0.74	-0.2
6,759,357	+		Pf6N2E2_5939	0.76	-0.3
6,759,357	+		Pf6N2E2_5939	0.76	+0.4
6,759,357	+		Pf6N2E2_5939	0.76	-1.5
6,759,357	+		Pf6N2E2_5939	0.76	-0.6
6,759,358	-		Pf6N2E2_5939	0.76	+0.4
6,759,358	-		Pf6N2E2_5939	0.76	+1.0
6,759,487	-		Pf6N2E2_5939	0.81	-0.7
6,759,487	-		Pf6N2E2_5939	0.81	+1.6
6,759,501	+		Pf6N2E2_5939	0.82	-0.6
6,759,501	+		Pf6N2E2_5939	0.82	+0.4
6,759,501	+		Pf6N2E2_5939	0.82	-0.3
6,759,502	-		Pf6N2E2_5939	0.82	-0.2
6,759,502	-		Pf6N2E2_5939	0.82	+1.0
6,759,523	+		Pf6N2E2_5939	0.83	+0.1
6,759,523	+		Pf6N2E2_5939	0.83	+0.5
6,759,524	-		Pf6N2E2_5939	0.83	+0.0
6,759,524	-		Pf6N2E2_5939	0.83	+0.2
6,759,524	-		Pf6N2E2_5939	0.83	-0.2
6,759,711	+				-0.5
6,759,711	+				+0.4
6,759,711	+				+0.1
6,759,711	+				+0.8
6,759,712	-				-1.0
6,759,712	-				-0.1
6,759,866	+				-0.6
6,759,866	+				-0.9
6,759,867	-				+0.3
6,759,867	-				+0.0
6,759,867	-				-0.8
6,759,872	+				-2.0
6,760,172	+		Pf6N2E2_5940	0.26	+0.1
6,760,172	+		Pf6N2E2_5940	0.26	-0.1
6,760,172	+		Pf6N2E2_5940	0.26	-0.2
6,760,173	-		Pf6N2E2_5940	0.26	+0.4
6,760,173	-		Pf6N2E2_5940	0.26	-1.1
6,760,173	-		Pf6N2E2_5940	0.26	-1.1
6,760,173	-		Pf6N2E2_5940	0.26	+1.2
6,760,173	-		Pf6N2E2_5940	0.26	+0.5
6,760,401	+		Pf6N2E2_5940	0.49	-0.4
6,760,402	-		Pf6N2E2_5940	0.49	-1.8
6,760,402	-		Pf6N2E2_5940	0.49	+0.4
6,760,403	+		Pf6N2E2_5940	0.49	-0.1
6,760,403	+		Pf6N2E2_5940	0.49	-0.1
6,760,403	+		Pf6N2E2_5940	0.49	-1.5
6,760,403	+		Pf6N2E2_5940	0.49	-0.3
6,760,403	+		Pf6N2E2_5940	0.49	+0.1
6,760,403	+		Pf6N2E2_5940	0.49	+0.7
6,760,403	+		Pf6N2E2_5940	0.49	+0.4
6,760,404	-		Pf6N2E2_5940	0.49	-0.4
6,760,404	-		Pf6N2E2_5940	0.49	-0.5
6,760,404	-		Pf6N2E2_5940	0.49	-0.2
6,760,404	-		Pf6N2E2_5940	0.49	+0.2
6,760,404	-		Pf6N2E2_5940	0.49	+2.6
6,760,404	-		Pf6N2E2_5940	0.49	+1.1
6,760,404	-		Pf6N2E2_5940	0.49	+0.3
6,760,404	-		Pf6N2E2_5940	0.49	-0.8
6,760,454	+		Pf6N2E2_5940	0.55	+0.4
6,760,523	+		Pf6N2E2_5940	0.62	-0.3
6,760,524	-		Pf6N2E2_5940	0.62	+0.1
6,760,682	+		Pf6N2E2_5940	0.78	-1.5
6,760,682	+		Pf6N2E2_5940	0.78	-0.7
6,760,730	-		Pf6N2E2_5940	0.83	-0.1
6,760,730	-		Pf6N2E2_5940	0.83	+0.4
6,760,743	+		Pf6N2E2_5940	0.84	-0.0
6,760,743	+		Pf6N2E2_5940	0.84	-0.6
6,760,744	-		Pf6N2E2_5940	0.84	-0.1
6,760,892	+				-0.1
6,760,892	+				+0.5
6,760,892	+				+0.2
6,760,892	+				+0.0
6,760,893	-				-1.8
6,760,893	-				-1.3
6,760,914	+				-1.1
6,760,914	+				-0.6
6,760,914	+				-0.0
6,760,915	-				-0.6
6,760,915	-				+1.8