Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5714

Experiment: Rifampicin 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.003 mg/ml
6,529,131	+		Pf6N2E2_5712	0.62	+0.6
6,529,131	+		Pf6N2E2_5712	0.62	-0.8
6,529,218	+		Pf6N2E2_5712	0.75	-0.8
6,529,219	-		Pf6N2E2_5712	0.75	-0.5
6,529,219	-		Pf6N2E2_5712	0.75	-0.3
6,529,219	-		Pf6N2E2_5712	0.75	-0.5
6,529,351	+				-0.9
6,529,368	+				+0.6
6,529,369	-				-0.1
6,529,369	-				-0.6
6,529,369	-				-0.6
6,529,369	-				-2.1
6,529,370	+				+0.6
6,529,371	-				-0.2
6,529,371	-				-0.5
6,529,463	+				-0.6
6,529,469	+				+1.0
6,529,469	+				-1.4
6,529,470	-				-0.4
6,529,470	-				+1.1
6,529,470	-				+1.5
6,529,470	-				+0.3
6,529,470	-				+0.4
6,529,470	-				-0.3
6,529,470	-				+0.4
6,529,470	-				-0.4
6,529,470	-				+0.6
6,529,470	-				+0.1
6,529,470	-				+0.3
6,529,472	-				-0.5
6,529,472	-				-0.4
6,529,472	-				+0.1
6,529,537	+		Pf6N2E2_5713	0.15	+1.8
6,529,537	+		Pf6N2E2_5713	0.15	+0.4
6,529,538	-		Pf6N2E2_5713	0.15	-0.4
6,529,538	-		Pf6N2E2_5713	0.15	+0.4
6,529,538	-		Pf6N2E2_5713	0.15	+0.1
6,529,538	-		Pf6N2E2_5713	0.15	-0.2
6,529,538	-		Pf6N2E2_5713	0.15	+0.6
6,529,538	-		Pf6N2E2_5713	0.15	-0.4
6,529,538	-		Pf6N2E2_5713	0.15	+0.2
6,529,538	-		Pf6N2E2_5713	0.15	-0.6
6,529,538	-		Pf6N2E2_5713	0.15	+0.4
6,529,612	+		Pf6N2E2_5713	0.33	-0.6
6,529,613	-		Pf6N2E2_5713	0.33	+0.3
6,529,639	+		Pf6N2E2_5713	0.39	-0.1
6,529,639	+		Pf6N2E2_5713	0.39	+0.4
6,529,639	+		Pf6N2E2_5713	0.39	+0.0
6,529,640	-		Pf6N2E2_5713	0.39	+0.7
6,529,640	-		Pf6N2E2_5713	0.39	+0.7
6,529,707	+		Pf6N2E2_5713	0.55	-0.8
6,529,780	+		Pf6N2E2_5713	0.72	-2.0
6,529,780	+		Pf6N2E2_5713	0.72	+1.0
6,529,780	+		Pf6N2E2_5713	0.72	+0.3
6,529,781	-		Pf6N2E2_5713	0.72	+0.2
6,529,783	+		Pf6N2E2_5713	0.73	+0.4
6,529,783	+		Pf6N2E2_5713	0.73	-0.0
6,529,784	-		Pf6N2E2_5713	0.73	+0.4
6,529,845	+		Pf6N2E2_5713	0.87	+0.5
6,529,893	-				+0.4
6,530,228	+		Pf6N2E2_5714	0.56	+0.5
6,530,229	-		Pf6N2E2_5714	0.56	-1.7
6,530,229	-		Pf6N2E2_5714	0.56	-0.7
6,530,229	-		Pf6N2E2_5714	0.56	-1.5
6,530,466	-				+0.6
6,530,466	-				+0.3
6,530,468	+				-1.6
6,530,468	+				+1.1
6,530,468	+				-1.0
6,530,468	+				-0.8
6,530,468	+				+0.2
6,530,469	-				+2.1
6,530,483	+				+0.9
6,530,483	+				-0.3
6,530,484	-				+0.9
6,530,484	-				-0.4
6,530,650	+		Pf6N2E2_5715	0.44	+2.2
6,530,827	+				+0.4
6,530,828	-				-1.5
6,530,828	-				+0.5
6,530,867	-				+0.9
6,530,879	-				+0.2
6,530,883	+				-0.7
6,530,883	+				+0.0
6,530,883	+				-1.2
6,530,883	+				-0.3
6,530,883	+				-0.8
6,530,883	+				+0.0
6,530,884	-				-2.4
6,530,884	-				-0.5
6,530,884	-				+0.6
6,530,884	-				+0.0
6,530,994	-				+1.1
6,531,031	-		Pf6N2E2_5716	0.15	-0.8
6,531,099	+		Pf6N2E2_5716	0.29	+0.4
6,531,099	+		Pf6N2E2_5716	0.29	-0.4
6,531,099	+		Pf6N2E2_5716	0.29	-0.5
6,531,327	+		Pf6N2E2_5716	0.78	+0.5
6,531,327	+		Pf6N2E2_5716	0.78	-0.2
6,531,327	+		Pf6N2E2_5716	0.78	+0.3
6,531,327	+		Pf6N2E2_5716	0.78	-0.8
6,531,327	+		Pf6N2E2_5716	0.78	+0.2
6,531,327	+		Pf6N2E2_5716	0.78	+0.1
6,531,327	+		Pf6N2E2_5716	0.78	+0.0
6,531,328	-		Pf6N2E2_5716	0.78	+0.2
6,531,328	-		Pf6N2E2_5716	0.78	+0.6
6,531,328	-		Pf6N2E2_5716	0.78	+0.4
6,531,328	-		Pf6N2E2_5716	0.78	-0.3
6,531,328	-		Pf6N2E2_5716	0.78	+1.0
6,531,328	-		Pf6N2E2_5716	0.78	-0.1
6,531,328	-		Pf6N2E2_5716	0.78	+0.6
6,531,328	-		Pf6N2E2_5716	0.78	-0.9
6,531,328	-		Pf6N2E2_5716	0.78	-0.3