Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4809

Experiment: Rifampicin 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.003 mg/ml
5,560,582	-				+4.1
5,560,582	-				+5.3
5,560,643	+				+0.5
5,560,643	+				+1.6
5,560,643	+				+0.4
5,560,643	+				-0.2
5,560,643	+				+0.8
5,560,643	+				+1.6
5,560,643	+				+2.2
5,560,643	+				+0.9
5,560,643	+				-1.1
5,560,644	-				+2.3
5,560,644	-				+1.2
5,560,644	-				+0.7
5,560,644	-				+2.2
5,560,644	-				-0.3
5,560,644	-				+1.0
5,560,644	-				+1.9
5,560,644	-				-0.2
5,560,644	-				+2.6
5,560,644	-				+2.9
5,560,644	-				+0.6
5,560,769	-		Pf6N2E2_4809	0.14	+0.0
5,560,851	+		Pf6N2E2_4809	0.22	+2.3
5,560,851	+		Pf6N2E2_4809	0.22	+2.2
5,560,881	+		Pf6N2E2_4809	0.25	+1.0
5,560,954	+		Pf6N2E2_4809	0.32	+1.5
5,560,954	+		Pf6N2E2_4809	0.32	+1.3
5,560,964	+		Pf6N2E2_4809	0.33	+1.3
5,560,964	+		Pf6N2E2_4809	0.33	+1.0
5,560,964	+		Pf6N2E2_4809	0.33	+1.9
5,560,964	+		Pf6N2E2_4809	0.33	+1.8
5,560,965	-		Pf6N2E2_4809	0.33	+2.9
5,560,991	+		Pf6N2E2_4809	0.35	+1.6
5,560,991	+				+2.1
5,560,991	+		Pf6N2E2_4809	0.35	+2.1
5,560,992	-		Pf6N2E2_4809	0.36	+2.1
5,561,059	+		Pf6N2E2_4809	0.42	+2.5
5,561,059	+		Pf6N2E2_4809	0.42	+0.8
5,561,059	+		Pf6N2E2_4809	0.42	+2.1
5,561,059	+		Pf6N2E2_4809	0.42	+1.6
5,561,059	+		Pf6N2E2_4809	0.42	+2.1
5,561,059	+		Pf6N2E2_4809	0.42	+1.8
5,561,059	+		Pf6N2E2_4809	0.42	+2.1
5,561,059	+		Pf6N2E2_4809	0.42	+2.2
5,561,059	+		Pf6N2E2_4809	0.42	+0.6
5,561,059	+		Pf6N2E2_4809	0.42	+1.7
5,561,060	-		Pf6N2E2_4809	0.42	+0.9
5,561,060	-		Pf6N2E2_4809	0.42	+2.9
5,561,060	-		Pf6N2E2_4809	0.42	+2.1
5,561,060	-		Pf6N2E2_4809	0.42	+1.4
5,561,060	-		Pf6N2E2_4809	0.42	+1.5
5,561,060	-		Pf6N2E2_4809	0.42	+1.3
5,561,060	-		Pf6N2E2_4809	0.42	+1.3
5,561,061	-		Pf6N2E2_4809	0.42	+2.4
5,561,107	+		Pf6N2E2_4809	0.47	+1.5
5,561,107	+		Pf6N2E2_4809	0.47	+0.8
5,561,107	+		Pf6N2E2_4809	0.47	+1.7
5,561,107	+		Pf6N2E2_4809	0.47	+2.7
5,561,107	+		Pf6N2E2_4809	0.47	+1.0
5,561,107	+		Pf6N2E2_4809	0.47	+1.6
5,561,108	-		Pf6N2E2_4809	0.47	+2.2
5,561,227	+		Pf6N2E2_4809	0.58	+1.7
5,561,227	+		Pf6N2E2_4809	0.58	+2.5
5,561,227	+		Pf6N2E2_4809	0.58	+2.1
5,561,227	+		Pf6N2E2_4809	0.58	+0.9
5,561,227	+		Pf6N2E2_4809	0.58	+1.7
5,561,227	+		Pf6N2E2_4809	0.58	+0.8
5,561,227	+		Pf6N2E2_4809	0.58	+0.0
5,561,227	+		Pf6N2E2_4809	0.58	+1.7
5,561,227	+		Pf6N2E2_4809	0.58	+1.6
5,561,228	+		Pf6N2E2_4809	0.59	+2.7
5,561,228	-		Pf6N2E2_4809	0.59	+0.5
5,561,228	-		Pf6N2E2_4809	0.59	+1.5
5,561,228	-		Pf6N2E2_4809	0.59	+0.6
5,561,228	-		Pf6N2E2_4809	0.59	+1.5
5,561,228	-		Pf6N2E2_4809	0.59	+2.0
5,561,228	-		Pf6N2E2_4809	0.59	+2.6
5,561,228	-		Pf6N2E2_4809	0.59	+2.7
5,561,228	-		Pf6N2E2_4809	0.59	+1.7
5,561,228	-		Pf6N2E2_4809	0.59	+0.9
5,561,293	+		Pf6N2E2_4809	0.65	+1.7
5,561,294	-		Pf6N2E2_4809	0.65	+1.7
5,561,294	-		Pf6N2E2_4809	0.65	+1.0
5,561,294	-		Pf6N2E2_4809	0.65	+1.9
5,561,294	-		Pf6N2E2_4809	0.65	+2.2
5,561,308	+		Pf6N2E2_4809	0.66	+1.6
5,561,308	+		Pf6N2E2_4809	0.66	+1.0
5,561,308	+		Pf6N2E2_4809	0.66	+2.7
5,561,309	-		Pf6N2E2_4809	0.66	+1.6
5,561,309	-		Pf6N2E2_4809	0.66	+1.3
5,561,383	+		Pf6N2E2_4809	0.74	+2.2
5,561,384	-		Pf6N2E2_4809	0.74	+2.2
5,561,477	+		Pf6N2E2_4809	0.83	+1.5
5,561,477	+		Pf6N2E2_4809	0.83	+1.4
5,561,478	-		Pf6N2E2_4809	0.83	+0.8
5,561,478	-		Pf6N2E2_4809	0.83	+1.3
5,561,478	-		Pf6N2E2_4809	0.83	+2.1
5,561,478	-		Pf6N2E2_4809	0.83	+2.1
5,561,478	-		Pf6N2E2_4809	0.83	-0.1
5,561,478	-		Pf6N2E2_4809	0.83	+1.7
5,561,530	+		Pf6N2E2_4809	0.88	+1.0
5,561,531	-		Pf6N2E2_4809	0.88	+1.5
5,561,560	+				+2.6
5,561,560	+				+2.6
5,561,560	+				+2.5
5,561,560	+				+1.6
5,561,560	+				-0.2
5,561,560	+				+1.4
5,561,560	+				+3.3
5,561,560	+				+1.8
5,561,560	+				+2.3
5,561,560	+				+0.9
5,561,560	+				+2.4
5,561,560	+				+1.2
5,561,560	+				+1.6
5,561,561	-				+2.6
5,561,561	-				+0.7
5,561,561	-				+1.5
5,561,561	-				+0.7
5,561,561	-				+2.5
5,561,561	-				+1.0
5,561,561	-				+1.0
5,561,561	-				+1.4
5,561,561	-				+1.8
5,561,562	+				+2.6
5,561,562	+				+1.8
5,561,562	+				+2.3
5,561,562	+				+1.2
5,561,562	+				+1.8
5,561,562	+				+1.2
5,561,562	+				+1.3
5,561,562	+				+1.3
5,561,562	+				+1.1
5,561,563	-				+1.0
5,561,563	-				+1.4
5,561,564	+				+2.2
5,561,564	+				+2.4
5,561,564	+				+0.6
5,561,564	+				+2.5
5,561,564	+				+2.1
5,561,564	+				+1.9
5,561,564	+				+4.0
5,561,564	+				+1.8
5,561,564	+				+2.2
5,561,564	+				+1.7
5,561,564	+				+1.3
5,561,564	+				+1.7
5,561,564	+				+2.7
5,561,564	+				+1.6
5,561,564	+				+1.3
5,561,565	-				+2.4
5,561,565	-				-0.2
5,561,565	-				+0.6
5,561,565	-				+1.0
5,561,565	-				+2.2
5,561,565	-				+1.5
5,561,565	-				+1.7
5,561,565	-				+2.5
5,561,565	-				+1.6
5,561,565	-				+1.5
5,561,565	-				+2.2
5,561,565	-				+1.5
5,561,705	+				+3.0
5,561,706	-				+0.9
5,561,706	-				+0.6
5,561,754	+		Pf6N2E2_4810	0.16	+2.7
5,561,982	+		Pf6N2E2_4810	0.50	+2.7
5,561,983	-		Pf6N2E2_4810	0.50	+0.3
5,562,098	+		Pf6N2E2_4810	0.67	+1.7
5,562,126	+		Pf6N2E2_4810	0.71	+2.7
5,562,126	+		Pf6N2E2_4810	0.71	+2.0
5,562,126	+		Pf6N2E2_4810	0.71	+2.9
5,562,126	+		Pf6N2E2_4810	0.71	+2.4
5,562,126	+		Pf6N2E2_4810	0.71	+2.0
5,562,126	+		Pf6N2E2_4810	0.71	+2.8
5,562,126	+		Pf6N2E2_4810	0.71	+3.0
5,562,127	-		Pf6N2E2_4810	0.71	+0.7
5,562,127	-		Pf6N2E2_4810	0.71	+3.1
5,562,127	-		Pf6N2E2_4810	0.71	+3.4
5,562,127	-		Pf6N2E2_4810	0.71	+1.8
5,562,127	-		Pf6N2E2_4810	0.71	+3.1
5,562,321	+				+0.2
5,562,321	+				+0.6
5,562,321	+				-0.9
5,562,321	+				+1.3
5,562,321	+				-0.2
5,562,321	+				+0.9
5,562,321	+				+0.4
5,562,321	+				-0.1
5,562,321	+				-0.9
5,562,322	-				+0.4
5,562,322	-				-1.7
5,562,322	-				-0.6
5,562,322	-				+0.1
5,562,322	-				+0.1
5,562,322	-				+0.3
5,562,322	-				-1.5
5,562,322	-				+1.2
5,562,402	-				+0.2
5,562,404	+				-0.0
5,562,428	+				-0.6