Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4544

Experiment: Rifampicin 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.003 mg/ml
5,274,362	-		Pf6N2E2_4541	0.79	+0.1
5,274,471	+				+0.3
5,274,471	+				+0.6
5,274,471	+				+0.1
5,274,472	-				+1.1
5,274,666	+				+0.7
5,274,666	+				-0.0
5,274,667	-				-0.5
5,274,678	+				-0.3
5,274,678	+				+0.5
5,274,679	-				+0.5
5,274,806	+		Pf6N2E2_4542	0.38	-0.2
5,274,806	+		Pf6N2E2_4542	0.38	-0.8
5,274,807	-		Pf6N2E2_4542	0.38	+2.1
5,274,807	-		Pf6N2E2_4542	0.38	-0.1
5,274,822	+		Pf6N2E2_4542	0.42	-1.2
5,274,893	+		Pf6N2E2_4542	0.61	+0.3
5,274,893	+		Pf6N2E2_4542	0.61	+0.3
5,274,893	+		Pf6N2E2_4542	0.61	-0.8
5,274,894	-		Pf6N2E2_4542	0.61	-0.2
5,274,894	-		Pf6N2E2_4542	0.61	+0.4
5,274,899	+		Pf6N2E2_4542	0.63	-0.7
5,274,957	-		Pf6N2E2_4542	0.78	+0.2
5,274,957	-		Pf6N2E2_4542	0.78	-1.2
5,274,957	-		Pf6N2E2_4542	0.78	+0.1
5,274,967	-		Pf6N2E2_4542	0.81	-1.1
5,274,967	-		Pf6N2E2_4542	0.81	-0.1
5,274,967	-		Pf6N2E2_4542	0.81	+0.3
5,275,017	-				-0.2
5,275,017	-				+0.4
5,275,017	-				+0.8
5,275,017	-				-0.3
5,275,017	-				-0.5
5,275,039	+				+0.2
5,275,039	+				+0.3
5,275,039	+				-2.8
5,275,040	-				-0.3
5,275,040	-				-0.6
5,275,069	+		Pf6N2E2_4543	0.11	-0.1
5,275,070	-		Pf6N2E2_4543	0.11	-0.9
5,275,226	+		Pf6N2E2_4543	0.86	-1.6
5,275,226	+		Pf6N2E2_4543	0.86	+0.1
5,275,557	-		Pf6N2E2_4544	0.14	-0.2
5,275,722	-		Pf6N2E2_4544	0.22	-0.6
5,276,129	+		Pf6N2E2_4544	0.41	-1.1
5,276,129	+		Pf6N2E2_4544	0.41	-0.1
5,276,130	-		Pf6N2E2_4544	0.41	-0.7
5,276,253	-		Pf6N2E2_4544	0.47	-0.2
5,276,465	+		Pf6N2E2_4544	0.57	+0.7
5,276,465	+		Pf6N2E2_4544	0.57	-2.0
5,276,466	-		Pf6N2E2_4544	0.57	+0.2
5,276,466	-		Pf6N2E2_4544	0.57	-0.1
5,276,750	+		Pf6N2E2_4544	0.71	-1.0
5,276,751	-		Pf6N2E2_4544	0.71	-0.7
5,276,861	+		Pf6N2E2_4544	0.76	-0.7
5,276,862	-		Pf6N2E2_4544	0.76	-0.4
5,276,862	-		Pf6N2E2_4544	0.76	-1.6
5,277,026	+		Pf6N2E2_4544	0.84	-0.6
5,277,027	-		Pf6N2E2_4544	0.84	-1.0
5,277,027	-		Pf6N2E2_4544	0.84	-0.2
5,277,027	-		Pf6N2E2_4544	0.84	-1.3
5,277,041	+		Pf6N2E2_4544	0.84	-1.7
5,277,041	+		Pf6N2E2_4544	0.84	+0.3
5,277,041	+		Pf6N2E2_4544	0.84	-0.2
5,277,041	+		Pf6N2E2_4544	0.84	-0.9
5,277,041	+		Pf6N2E2_4544	0.84	+0.3
5,277,041	+		Pf6N2E2_4544	0.84	-0.2
5,277,041	+		Pf6N2E2_4544	0.84	+0.5
5,277,042	-		Pf6N2E2_4544	0.85	-0.7
5,277,042	-		Pf6N2E2_4544	0.85	+0.4
5,277,042	-		Pf6N2E2_4544	0.85	-0.3
5,277,042	-		Pf6N2E2_4544	0.85	-0.0
5,277,042	-		Pf6N2E2_4544	0.85	-1.7
5,277,042	-		Pf6N2E2_4544	0.85	+0.9
5,277,148	+		Pf6N2E2_4544	0.90	+0.2
5,277,168	+				+0.2
5,277,169	-				+1.5
5,277,187	+				-0.5
5,277,219	-				-1.8
5,277,224	+				+0.5
5,277,224	+				+0.4
5,277,224	+				-0.0
5,277,352	+				-1.8
5,277,352	+				-0.2
5,277,352	+				+0.3
5,277,352	+				-0.7
5,277,352	+				+0.2
5,277,353	-				-2.1
5,277,377	+				+0.2
5,277,478	+		Pf6N2E2_4545	0.19	-0.7
5,278,003	+		Pf6N2E2_4546	0.82	-0.9
5,278,003	+		Pf6N2E2_4546	0.82	+4.2
5,278,003	+		Pf6N2E2_4546	0.82	+0.4
5,278,003	+		Pf6N2E2_4546	0.82	+0.2
5,278,004	-		Pf6N2E2_4546	0.82	-0.4
5,278,004	-		Pf6N2E2_4546	0.82	+1.4
5,278,004	-		Pf6N2E2_4546	0.82	-0.1
5,278,004	-		Pf6N2E2_4546	0.82	-1.0
5,278,004	-		Pf6N2E2_4546	0.82	+0.2
5,278,068	+				-0.6
5,278,068	+				-0.3
5,278,068	+				+0.4
5,278,090	+				+0.1
5,278,091	-				-0.7
5,278,215	-				-0.6
5,278,215	-				+1.0
5,278,215	-				-0.9
5,278,215	-				-0.8
5,278,215	-				-0.9
5,278,215	-				+0.1
5,278,219	-				-0.6
5,278,219	-				+0.8
5,278,244	+				-0.1
5,278,244	+				-0.2