Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_44

Experiment: Rifampicin 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.003 mg/ml
82,003	+		Pf6N2E2_43	0.50	-2.1
82,049	-		Pf6N2E2_43	0.53	-1.6
82,619	-				-1.8
82,619	-				-0.6
82,619	-				-2.6
82,619	-				-0.0
82,619	-				+0.0
82,666	+				-1.9
82,667	-				+1.0
82,667	-				-0.8
82,667	-				-1.3
82,753	+				-1.5
82,753	+				+1.0
82,753	+				-0.8
82,754	-				-0.1
82,754	-				+1.2
82,754	-				+0.4
82,754	-				+0.5
82,754	-				-0.9
82,828	+				+1.6
82,829	-				+0.3
82,829	-				-2.8
82,829	-				-0.6
82,829	-				+0.2
82,829	-				+0.9
82,829	-				+0.8
82,834	+				-0.4
82,861	-				+0.8
82,861	-				-0.1
82,887	+				-0.5
82,887	+				-0.8
82,888	-				-0.7
82,888	-				-2.1
82,888	-				-0.1
82,905	+				-0.3
82,906	-				+1.6
82,912	+				+0.6
82,912	+				+0.4
82,912	+				+1.0
82,913	-				+0.4
82,948	+				-1.4
83,035	+				+2.1
83,035	+				+0.4
83,036	-				+0.5
83,099	+		Pf6N2E2_44	0.10	-0.1
83,100	-		Pf6N2E2_44	0.10	+2.0
83,100	-		Pf6N2E2_44	0.10	-1.3
83,136	-				+1.7
83,158	+		Pf6N2E2_44	0.14	-0.6
83,204	+		Pf6N2E2_44	0.16	+0.1
83,220	-		Pf6N2E2_44	0.17	+2.9
83,321	+		Pf6N2E2_44	0.23	+0.5
83,321	+		Pf6N2E2_44	0.23	+0.9
83,322	-		Pf6N2E2_44	0.23	+0.9
83,366	+		Pf6N2E2_44	0.26	-0.1
83,367	-		Pf6N2E2_44	0.26	-1.1
83,367	-		Pf6N2E2_44	0.26	+1.7
83,375	+		Pf6N2E2_44	0.27	-0.3
83,375	+		Pf6N2E2_44	0.27	+0.2
83,432	+		Pf6N2E2_44	0.30	-0.6
83,432	+		Pf6N2E2_44	0.30	-0.5
83,432	+		Pf6N2E2_44	0.30	+1.0
83,433	-		Pf6N2E2_44	0.30	+1.1
83,529	+		Pf6N2E2_44	0.36	+1.0
83,529	+		Pf6N2E2_44	0.36	-0.3
83,529	+		Pf6N2E2_44	0.36	-0.1
83,530	-		Pf6N2E2_44	0.36	+0.5
83,530	-		Pf6N2E2_44	0.36	-0.2
84,219	+		Pf6N2E2_44	0.77	+0.2
84,219	+		Pf6N2E2_44	0.77	-0.4
84,219	+		Pf6N2E2_44	0.77	+1.4
84,220	-		Pf6N2E2_44	0.77	+1.0
84,220	-		Pf6N2E2_44	0.77	-0.2
84,858	+				+0.8
84,859	-				-0.8
85,081	-		Pf6N2E2_45	0.21	+0.6
85,081	-		Pf6N2E2_45	0.21	+0.8
85,081	-		Pf6N2E2_45	0.21	-0.2
85,089	+		Pf6N2E2_45	0.21	+0.1
85,090	-		Pf6N2E2_45	0.21	+0.2
85,239	+		Pf6N2E2_45	0.32	+0.7
85,239	+		Pf6N2E2_45	0.32	+0.9
85,240	-		Pf6N2E2_45	0.32	+0.1
85,344	+		Pf6N2E2_45	0.39	-1.0
85,344	+		Pf6N2E2_45	0.39	+1.5
85,344	+		Pf6N2E2_45	0.39	+0.8
85,344	+		Pf6N2E2_45	0.39	-2.3
85,344	+		Pf6N2E2_45	0.39	-0.3
85,344	+		Pf6N2E2_45	0.39	+1.2
85,344	+		Pf6N2E2_45	0.39	-0.5
85,345	-		Pf6N2E2_45	0.39	+0.7
85,345	-		Pf6N2E2_45	0.39	+1.0
85,345	-		Pf6N2E2_45	0.39	+0.8
85,345	-		Pf6N2E2_45	0.39	+0.5
85,345	-		Pf6N2E2_45	0.39	+0.7
85,345	-		Pf6N2E2_45	0.39	-0.4
85,458	+		Pf6N2E2_45	0.47	-0.2
85,458	+		Pf6N2E2_45	0.47	-0.6
85,458	+		Pf6N2E2_45	0.47	+0.5
85,459	-		Pf6N2E2_45	0.47	+0.1
85,459	-		Pf6N2E2_45	0.47	-0.3
85,459	-		Pf6N2E2_45	0.47	+1.2
85,459	-		Pf6N2E2_45	0.47	-0.1
85,459	-		Pf6N2E2_45	0.47	-0.4
85,483	+		Pf6N2E2_45	0.49	+1.4
85,510	-		Pf6N2E2_45	0.51	-0.4
85,510	-		Pf6N2E2_45	0.51	-1.5
85,562	+		Pf6N2E2_45	0.55	-0.2
85,562	+		Pf6N2E2_45	0.55	+1.1
85,562	+		Pf6N2E2_45	0.55	+0.0
85,593	+		Pf6N2E2_45	0.57	-2.2
85,594	-		Pf6N2E2_45	0.57	-0.5