Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4236

Experiment: Rifampicin 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.003 mg/ml
4,926,431	+		Pf6N2E2_4234	0.80	+1.7
4,926,431	+		Pf6N2E2_4234	0.80	+0.0
4,926,431	+		Pf6N2E2_4234	0.80	+0.9
4,926,432	-		Pf6N2E2_4234	0.80	+0.6
4,926,745	-		Pf6N2E2_4235	0.13	+0.3
4,926,754	+		Pf6N2E2_4235	0.14	+1.0
4,926,955	+		Pf6N2E2_4235	0.43	-1.0
4,926,956	-		Pf6N2E2_4235	0.43	-0.4
4,926,956	-		Pf6N2E2_4235	0.43	+0.5
4,926,970	+		Pf6N2E2_4235	0.45	+0.7
4,926,970	+		Pf6N2E2_4235	0.45	-0.1
4,926,971	-		Pf6N2E2_4235	0.45	+0.3
4,926,971	-		Pf6N2E2_4235	0.45	-0.2
4,926,971	-		Pf6N2E2_4235	0.45	-2.5
4,927,088	+		Pf6N2E2_4235	0.61	+0.6
4,927,088	+		Pf6N2E2_4235	0.61	-0.5
4,927,088	+		Pf6N2E2_4235	0.61	+2.0
4,927,089	-		Pf6N2E2_4235	0.61	-0.8
4,927,089	-		Pf6N2E2_4235	0.61	+1.7
4,927,089	-		Pf6N2E2_4235	0.61	-0.1
4,927,102	+		Pf6N2E2_4235	0.63	+0.6
4,927,102	+		Pf6N2E2_4235	0.63	+0.4
4,927,103	-		Pf6N2E2_4235	0.63	+0.6
4,927,177	+		Pf6N2E2_4235	0.74	-0.1
4,927,177	+		Pf6N2E2_4235	0.74	+0.1
4,927,178	-		Pf6N2E2_4235	0.74	-0.5
4,927,178	-		Pf6N2E2_4235	0.74	+0.9
4,927,178	-		Pf6N2E2_4235	0.74	+0.5
4,927,178	-		Pf6N2E2_4235	0.74	-1.9
4,927,178	-		Pf6N2E2_4235	0.74	-1.0
4,927,225	+		Pf6N2E2_4235	0.81	-0.1
4,927,225	+		Pf6N2E2_4235	0.81	+0.2
4,927,225	+		Pf6N2E2_4235	0.81	+0.3
4,927,225	+		Pf6N2E2_4235	0.81	+0.4
4,927,225	+		Pf6N2E2_4235	0.81	-0.7
4,927,226	-		Pf6N2E2_4235	0.81	+0.6
4,927,226	-		Pf6N2E2_4235	0.81	+0.1
4,927,226	-		Pf6N2E2_4235	0.81	+0.3
4,927,226	-		Pf6N2E2_4235	0.81	+0.0
4,927,226	-		Pf6N2E2_4235	0.81	+0.5
4,927,226	-		Pf6N2E2_4235	0.81	-1.1
4,927,226	-		Pf6N2E2_4235	0.81	+0.4
4,927,226	-		Pf6N2E2_4235	0.81	+0.2
4,927,267	+		Pf6N2E2_4235	0.86	+0.0
4,927,267	+		Pf6N2E2_4235	0.86	-0.8
4,927,268	-		Pf6N2E2_4235	0.87	-1.0
4,927,268	-		Pf6N2E2_4235	0.87	+0.8
4,927,268	-		Pf6N2E2_4235	0.87	+0.1
4,927,268	-		Pf6N2E2_4235	0.87	-0.1
4,927,268	-		Pf6N2E2_4235	0.87	+1.1
4,927,372	+				+0.9
4,927,372	+				+0.9
4,927,416	-				-2.0
4,927,416	-				+0.6
4,927,448	+				-0.6
4,927,448	+				+0.7
4,927,449	-				+1.8
4,927,449	-				+0.5
4,927,449	-				-3.0
4,927,600	+		Pf6N2E2_4236	0.17	-1.9
4,927,600	+		Pf6N2E2_4236	0.17	-1.3
4,927,600	+		Pf6N2E2_4236	0.17	-0.4
4,927,601	-		Pf6N2E2_4236	0.17	-1.4
4,927,631	+		Pf6N2E2_4236	0.20	-0.5
4,927,631	+		Pf6N2E2_4236	0.20	+0.3
4,927,631	+		Pf6N2E2_4236	0.20	-0.7
4,927,631	+		Pf6N2E2_4236	0.20	-0.3
4,927,631	+		Pf6N2E2_4236	0.20	-1.9
4,927,631	+		Pf6N2E2_4236	0.20	+1.2
4,927,631	+		Pf6N2E2_4236	0.20	+0.2
4,927,632	-		Pf6N2E2_4236	0.20	-1.7
4,927,632	-		Pf6N2E2_4236	0.20	-1.1
4,927,745	+		Pf6N2E2_4236	0.30	-0.4
4,927,746	-		Pf6N2E2_4236	0.30	+0.4
4,927,746	-		Pf6N2E2_4236	0.30	-1.9
4,927,746	-		Pf6N2E2_4236	0.30	-0.1
4,927,925	+		Pf6N2E2_4236	0.46	-0.9
4,927,925	+		Pf6N2E2_4236	0.46	+0.1
4,927,925	+		Pf6N2E2_4236	0.46	+0.0
4,927,925	+		Pf6N2E2_4236	0.46	-0.2
4,927,925	+		Pf6N2E2_4236	0.46	-0.7
4,927,925	+		Pf6N2E2_4236	0.46	-0.3
4,927,926	-		Pf6N2E2_4236	0.46	+1.1
4,927,926	-		Pf6N2E2_4236	0.46	-0.0
4,927,928	+		Pf6N2E2_4236	0.46	-0.0
4,928,034	-		Pf6N2E2_4236	0.55	-0.6
4,928,082	+		Pf6N2E2_4236	0.60	-1.2
4,928,090	+		Pf6N2E2_4236	0.60	-1.1
4,928,090	+		Pf6N2E2_4236	0.60	+0.3
4,928,090	+		Pf6N2E2_4236	0.60	+0.1
4,928,090	+		Pf6N2E2_4236	0.60	-0.6
4,928,090	+		Pf6N2E2_4236	0.60	-1.0
4,928,090	+		Pf6N2E2_4236	0.60	+1.1
4,928,090	+		Pf6N2E2_4236	0.60	-0.5
4,928,091	-		Pf6N2E2_4236	0.60	-1.0
4,928,091	-		Pf6N2E2_4236	0.60	-0.3
4,928,091	-		Pf6N2E2_4236	0.60	-0.8
4,928,091	-		Pf6N2E2_4236	0.60	-0.7
4,928,091	-		Pf6N2E2_4236	0.60	+0.5
4,928,091	-		Pf6N2E2_4236	0.60	-0.1
4,928,091	-		Pf6N2E2_4236	0.60	-0.7
4,928,091	-		Pf6N2E2_4236	0.60	+0.4
4,928,091	-		Pf6N2E2_4236	0.60	+0.3
4,928,091	-		Pf6N2E2_4236	0.60	-0.2
4,928,196	-		Pf6N2E2_4236	0.70	-1.1
4,928,196	-		Pf6N2E2_4236	0.70	-0.5
4,928,207	+		Pf6N2E2_4236	0.71	-0.5
4,928,207	+		Pf6N2E2_4236	0.71	+0.9
4,928,208	-		Pf6N2E2_4236	0.71	+1.2
4,928,267	+		Pf6N2E2_4236	0.76	+0.7
4,928,267	+		Pf6N2E2_4236	0.76	+0.7
4,928,267	+		Pf6N2E2_4236	0.76	-0.7
4,928,321	+		Pf6N2E2_4236	0.81	+0.9
4,928,321	+		Pf6N2E2_4236	0.81	-0.0
4,928,321	+		Pf6N2E2_4236	0.81	-0.5
4,928,344	+		Pf6N2E2_4236	0.83	-0.8
4,928,344	+		Pf6N2E2_4236	0.83	+0.3
4,928,345	-		Pf6N2E2_4236	0.83	+0.9
4,928,510	+				+0.1
4,928,511	-				-0.9
4,928,511	-				-0.5
4,928,511	-				+0.5
4,928,520	-				-1.0
4,928,711	+		Pf6N2E2_4237	0.15	+0.4
4,928,711	+		Pf6N2E2_4237	0.15	+0.8
4,928,711	+		Pf6N2E2_4237	0.15	-1.4
4,928,712	-		Pf6N2E2_4237	0.15	+0.2
4,928,816	+		Pf6N2E2_4237	0.24	-0.4
4,928,816	+		Pf6N2E2_4237	0.24	+0.6
4,928,817	-		Pf6N2E2_4237	0.25	-0.7
4,928,817	-		Pf6N2E2_4237	0.25	-0.6
4,928,819	+		Pf6N2E2_4237	0.25	-0.8
4,928,819	+		Pf6N2E2_4237	0.25	-0.2
4,928,854	+		Pf6N2E2_4237	0.28	+2.0
4,928,854	+		Pf6N2E2_4237	0.28	-0.4
4,928,855	-		Pf6N2E2_4237	0.28	+1.5
4,928,855	-		Pf6N2E2_4237	0.28	-0.2
4,928,882	+		Pf6N2E2_4237	0.30	+0.3
4,928,882	+		Pf6N2E2_4237	0.30	-0.0
4,928,965	+		Pf6N2E2_4237	0.38	+1.0
4,928,965	+		Pf6N2E2_4237	0.38	-0.3
4,928,966	-		Pf6N2E2_4237	0.38	+0.5
4,928,966	-		Pf6N2E2_4237	0.38	+0.5
4,928,992	+		Pf6N2E2_4237	0.40	+0.4
4,928,992	+		Pf6N2E2_4237	0.40	+0.3
4,928,992	+		Pf6N2E2_4237	0.40	-0.9
4,928,992	+		Pf6N2E2_4237	0.40	+0.4
4,928,993	-		Pf6N2E2_4237	0.40	-0.0
4,929,067	+		Pf6N2E2_4237	0.47	+0.1
4,929,067	+		Pf6N2E2_4237	0.47	-1.2
4,929,067	+		Pf6N2E2_4237	0.47	+0.4
4,929,067	+		Pf6N2E2_4237	0.47	+0.2
4,929,067	+		Pf6N2E2_4237	0.47	+4.0
4,929,068	-		Pf6N2E2_4237	0.47	-0.8
4,929,068	-		Pf6N2E2_4237	0.47	-0.2
4,929,068	-		Pf6N2E2_4237	0.47	-1.1
4,929,068	-		Pf6N2E2_4237	0.47	-0.9
4,929,068	-		Pf6N2E2_4237	0.47	+0.9
4,929,068	-		Pf6N2E2_4237	0.47	-0.4
4,929,068	-		Pf6N2E2_4237	0.47	+0.3
4,929,068	-		Pf6N2E2_4237	0.47	-0.1
4,929,068	-		Pf6N2E2_4237	0.47	+0.5
4,929,074	+		Pf6N2E2_4237	0.47	-0.0
4,929,075	-		Pf6N2E2_4237	0.47	+0.8
4,929,075	-		Pf6N2E2_4237	0.47	-0.1
4,929,075	-		Pf6N2E2_4237	0.47	+0.5
4,929,106	+		Pf6N2E2_4237	0.50	-0.8
4,929,106	+		Pf6N2E2_4237	0.50	-0.4
4,929,106	+		Pf6N2E2_4237	0.50	-0.5
4,929,106	+		Pf6N2E2_4237	0.50	+0.3
4,929,107	-		Pf6N2E2_4237	0.50	-0.6
4,929,107	-		Pf6N2E2_4237	0.50	+0.6
4,929,395	+		Pf6N2E2_4237	0.76	-1.3
4,929,395	+		Pf6N2E2_4237	0.76	-0.1
4,929,395	+		Pf6N2E2_4237	0.76	-0.5
4,929,395	+		Pf6N2E2_4237	0.76	-0.1
4,929,396	-		Pf6N2E2_4237	0.76	-0.2
4,929,462	-		Pf6N2E2_4237	0.82	-1.3
4,929,526	+		Pf6N2E2_4237	0.87	-0.6
4,929,527	-		Pf6N2E2_4237	0.87	-0.3
4,929,527	-		Pf6N2E2_4237	0.87	-1.3
4,929,527	-		Pf6N2E2_4237	0.87	+0.9