Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4060

Experiment: Rifampicin 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.003 mg/ml
4,736,088	+		Pf6N2E2_4058	0.75	-1.1
4,736,088	+		Pf6N2E2_4058	0.75	-0.8
4,736,089	-		Pf6N2E2_4058	0.75	+0.1
4,736,089	-		Pf6N2E2_4058	0.75	+0.4
4,736,131	-		Pf6N2E2_4058	0.79	-0.4
4,736,145	+		Pf6N2E2_4058	0.80	+1.0
4,736,145	+		Pf6N2E2_4058	0.80	+0.4
4,736,145	+		Pf6N2E2_4058	0.80	-1.4
4,736,146	-		Pf6N2E2_4058	0.80	+0.1
4,736,146	-		Pf6N2E2_4058	0.80	+0.7
4,736,146	-		Pf6N2E2_4058	0.80	-1.1
4,736,187	+		Pf6N2E2_4058	0.84	-0.4
4,736,187	+		Pf6N2E2_4058	0.84	+0.7
4,736,187	+		Pf6N2E2_4058	0.84	+1.7
4,736,188	-		Pf6N2E2_4058	0.85	-0.1
4,736,188	-		Pf6N2E2_4058	0.85	+0.1
4,736,188	-		Pf6N2E2_4058	0.85	-0.1
4,736,188	-		Pf6N2E2_4058	0.85	-0.2
4,736,188	-		Pf6N2E2_4058	0.85	-0.7
4,736,287	+				+0.7
4,736,344	-				-0.1
4,736,519	+				+0.2
4,736,559	+				-0.0
4,736,559	+				-0.5
4,736,559	+				-0.8
4,736,559	+				+0.6
4,736,559	+				+0.1
4,736,560	-				+0.0
4,736,560	-				-0.7
4,736,560	-				-1.1
4,736,560	-				-0.3
4,736,572	+				+0.0
4,736,609	+		Pf6N2E2_4059	0.14	+0.6
4,736,840	+				+2.1
4,736,840	+				-1.5
4,736,841	-				+1.2
4,736,879	+				-0.2
4,736,879	+				+0.8
4,736,879	+				-1.3
4,736,879	+				-0.6
4,736,879	+				+0.1
4,736,879	+				+1.1
4,736,879	+				-0.2
4,736,879	+				+0.7
4,736,879	+				+0.3
4,736,879	+				-0.8
4,736,879	+				-1.8
4,736,879	+				+0.3
4,736,879	+				-0.5
4,736,880	-				+0.4
4,736,880	-				+0.7
4,736,880	-				+0.6
4,736,880	-				+1.3
4,736,880	-				+0.4
4,736,880	-				-0.2
4,736,880	-				+0.9
4,736,880	-				-0.1
4,736,880	-				-0.2
4,736,880	-				+1.3
4,736,928	+				+1.3
4,736,928	+				+0.7
4,736,929	-				-0.9
4,737,035	+				-0.5
4,737,190	+		Pf6N2E2_4060	0.13	-0.4
4,737,190	+		Pf6N2E2_4060	0.13	+0.5
4,737,190	+		Pf6N2E2_4060	0.13	+0.8
4,737,191	-		Pf6N2E2_4060	0.13	+1.0
4,737,258	+		Pf6N2E2_4060	0.19	+0.5
4,737,330	+		Pf6N2E2_4060	0.25	-0.1
4,737,330	+		Pf6N2E2_4060	0.25	+0.7
4,737,330	+		Pf6N2E2_4060	0.25	+0.2
4,737,330	+		Pf6N2E2_4060	0.25	+0.7
4,737,330	+		Pf6N2E2_4060	0.25	+1.2
4,737,330	+		Pf6N2E2_4060	0.25	+0.2
4,737,330	+		Pf6N2E2_4060	0.25	+1.4
4,737,330	+		Pf6N2E2_4060	0.25	-0.1
4,737,330	+		Pf6N2E2_4060	0.25	+0.7
4,737,330	+		Pf6N2E2_4060	0.25	+0.3
4,737,330	+		Pf6N2E2_4060	0.25	+0.9
4,737,331	-		Pf6N2E2_4060	0.25	+0.9
4,737,331	-		Pf6N2E2_4060	0.25	+0.4
4,737,331	-		Pf6N2E2_4060	0.25	-1.0
4,737,331	-		Pf6N2E2_4060	0.25	+0.9
4,737,331	-		Pf6N2E2_4060	0.25	-1.0
4,737,331	-		Pf6N2E2_4060	0.25	+1.8
4,737,331	-		Pf6N2E2_4060	0.25	-0.8
4,737,331	-		Pf6N2E2_4060	0.25	+0.1
4,737,331	-		Pf6N2E2_4060	0.25	+1.3
4,737,331	-		Pf6N2E2_4060	0.25	+0.2
4,737,331	-		Pf6N2E2_4060	0.25	-0.2
4,737,331	-		Pf6N2E2_4060	0.25	-1.2
4,737,331	-		Pf6N2E2_4060	0.25	+0.5
4,737,375	+		Pf6N2E2_4060	0.29	+0.9
4,737,375	+		Pf6N2E2_4060	0.29	+1.3
4,737,375	+		Pf6N2E2_4060	0.29	+0.1
4,737,376	-		Pf6N2E2_4060	0.29	+0.8
4,737,376	-		Pf6N2E2_4060	0.29	+1.1
4,737,376	-		Pf6N2E2_4060	0.29	+0.3
4,737,376	-		Pf6N2E2_4060	0.29	+0.2
4,737,376	-		Pf6N2E2_4060	0.29	+1.2
4,737,376	-		Pf6N2E2_4060	0.29	+1.2
4,737,376	-		Pf6N2E2_4060	0.29	+0.1
4,737,614	+		Pf6N2E2_4060	0.50	+0.8
4,737,614	+		Pf6N2E2_4060	0.50	-1.2
4,737,615	-		Pf6N2E2_4060	0.50	-1.4
4,737,687	+		Pf6N2E2_4060	0.56	-2.5
4,737,688	-		Pf6N2E2_4060	0.56	+0.8
4,737,688	-		Pf6N2E2_4060	0.56	-0.6
4,737,688	-		Pf6N2E2_4060	0.56	+1.3
4,737,789	+		Pf6N2E2_4060	0.65	-0.8
4,737,789	+		Pf6N2E2_4060	0.65	-0.3
4,737,789	+		Pf6N2E2_4060	0.65	+0.5
4,737,789	+		Pf6N2E2_4060	0.65	+0.6
4,737,790	-		Pf6N2E2_4060	0.65	+0.1
4,737,790	-		Pf6N2E2_4060	0.65	+0.5
4,737,790	-		Pf6N2E2_4060	0.65	+1.3
4,737,888	+		Pf6N2E2_4060	0.73	+1.0
4,737,889	-		Pf6N2E2_4060	0.73	+1.9
4,738,065	+		Pf6N2E2_4060	0.88	-0.7
4,738,144	-				+1.1
4,738,144	-				+0.0
4,738,359	+		Pf6N2E2_4061	0.77	+2.9
4,738,360	-		Pf6N2E2_4061	0.78	+1.2
4,738,378	+		Pf6N2E2_4061	0.89	+0.1
4,738,378	+		Pf6N2E2_4061	0.89	+1.3
4,738,378	+		Pf6N2E2_4061	0.89	-0.9
4,738,378	+		Pf6N2E2_4061	0.89	-0.3
4,738,379	-		Pf6N2E2_4061	0.89	-0.4
4,738,379	-		Pf6N2E2_4061	0.89	-1.8
4,738,379	-		Pf6N2E2_4061	0.89	+0.6
4,738,379	-		Pf6N2E2_4061	0.89	+0.2
4,738,379	-		Pf6N2E2_4061	0.89	+0.5
4,738,402	+				-0.4
4,738,402	+				+1.2
4,738,403	-				+0.0
4,738,403	-				-0.3
4,738,403	-				-0.2
4,738,433	+		Pf6N2E2_4062	0.26	-0.3
4,738,433	+		Pf6N2E2_4062	0.26	+0.2
4,738,433	+		Pf6N2E2_4062	0.26	+1.9
4,738,433	+		Pf6N2E2_4062	0.26	+0.3
4,738,433	+		Pf6N2E2_4062	0.26	+0.8
4,738,434	-		Pf6N2E2_4062	0.26	-0.2
4,738,434	-		Pf6N2E2_4062	0.26	+0.3
4,738,551	+				+0.5
4,738,551	+				-0.9
4,738,552	-				+4.4
4,738,552	-				+4.3
4,738,552	-				+4.4
4,738,597	+				+1.2
4,738,835	+		Pf6N2E2_4063	0.48	+0.1
4,738,835	+		Pf6N2E2_4063	0.48	+0.3
4,738,835	+		Pf6N2E2_4063	0.48	+0.2
4,738,835	+		Pf6N2E2_4063	0.48	-0.4
4,738,836	-		Pf6N2E2_4063	0.48	+4.9
4,738,836	-		Pf6N2E2_4063	0.48	+6.6
4,738,836	-		Pf6N2E2_4063	0.48	+7.8
4,738,953	+		Pf6N2E2_4063	0.67	+1.4
4,739,088	+		Pf6N2E2_4063	0.89	-0.0
4,739,089	-		Pf6N2E2_4063	0.89	+3.5
4,739,089	-		Pf6N2E2_4063	0.89	+3.5
4,739,089	-		Pf6N2E2_4063	0.89	+4.4
4,739,135	+				-0.9
4,739,155	+				+0.9
4,739,155	+				+3.9
4,739,155	+				+6.2
4,739,155	+				+2.1
4,739,155	+				+1.6