Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3794

Experiment: Rifampicin 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.003 mg/ml
4,419,224	+				+3.4
4,419,335	-				+3.2
4,419,397	-				+1.8
4,419,401	+				+2.6
4,419,401	+				+2.2
4,419,401	+				+3.0
4,419,402	-				-2.1
4,419,402	-				+0.6
4,419,402	-				+1.6
4,419,402	-				-1.3
4,419,520	+				+4.1
4,419,521	-				-0.8
4,419,521	-				+0.6
4,419,524	+				+3.8
4,419,524	+				+3.8
4,419,525	-				-0.1
4,419,525	-				+1.5
4,419,569	+				+4.2
4,419,569	+				+4.0
4,419,574	-				+0.5
4,419,574	-				-0.8
4,419,574	-				-0.9
4,419,576	+				+3.7
4,419,577	-				-1.3
4,419,610	+				+4.0
4,419,610	+				+3.6
4,419,610	+				+3.4
4,419,610	+				+3.7
4,419,611	-				-1.5
4,419,682	+				+3.8
4,419,742	-		Pf6N2E2_3793	0.16	-1.7
4,419,788	+		Pf6N2E2_3793	0.26	+3.6
4,419,788	+		Pf6N2E2_3793	0.26	+4.5
4,419,788	+		Pf6N2E2_3793	0.26	+4.2
4,419,789	-		Pf6N2E2_3793	0.26	-2.1
4,419,789	-		Pf6N2E2_3793	0.26	-1.5
4,419,789	-		Pf6N2E2_3793	0.26	-3.1
4,419,789	-		Pf6N2E2_3793	0.26	-1.6
4,419,956	+		Pf6N2E2_3793	0.65	+4.0
4,419,957	-		Pf6N2E2_3793	0.65	-2.7
4,419,960	+		Pf6N2E2_3793	0.66	+4.0
4,419,960	+		Pf6N2E2_3793	0.66	+4.8
4,419,961	-		Pf6N2E2_3793	0.66	-2.1
4,419,961	-		Pf6N2E2_3793	0.66	-1.7
4,419,969	+		Pf6N2E2_3793	0.68	+4.0
4,419,969	+		Pf6N2E2_3793	0.68	+4.6
4,419,969	+		Pf6N2E2_3793	0.68	+4.5
4,419,970	-		Pf6N2E2_3793	0.68	-2.3
4,419,970	-		Pf6N2E2_3793	0.68	-1.3
4,420,066	+		Pf6N2E2_3793	0.90	+3.7
4,420,067	-				-2.5
4,420,381	+		Pf6N2E2_3794	0.28	+3.6
4,420,381	+		Pf6N2E2_3794	0.28	+2.5
4,420,381	+		Pf6N2E2_3794	0.28	+2.3
4,420,382	-		Pf6N2E2_3794	0.28	-0.5
4,420,382	-		Pf6N2E2_3794	0.28	+0.8
4,420,382	-		Pf6N2E2_3794	0.28	-0.6
4,420,469	+		Pf6N2E2_3794	0.37	+1.1
4,420,469	+		Pf6N2E2_3794	0.37	+3.1
4,420,594	+		Pf6N2E2_3794	0.50	+1.9
4,420,594	+		Pf6N2E2_3794	0.50	+3.0
4,420,595	-		Pf6N2E2_3794	0.50	+1.0
4,420,595	-		Pf6N2E2_3794	0.50	+1.9
4,420,639	+		Pf6N2E2_3794	0.55	+2.4
4,420,639	+		Pf6N2E2_3794	0.55	+2.4
4,420,639	+		Pf6N2E2_3794	0.55	+2.5
4,420,640	-		Pf6N2E2_3794	0.55	-0.6
4,420,724	-		Pf6N2E2_3794	0.63	+0.6
4,420,915	+		Pf6N2E2_3794	0.83	+1.1
4,420,915	+		Pf6N2E2_3794	0.83	+0.4
4,420,915	+		Pf6N2E2_3794	0.83	+0.6
4,421,005	+				+2.7
4,421,006	-				+1.4
4,421,006	-				-0.6
4,421,121	+				+1.5
4,421,121	+				+0.7
4,421,121	+				+1.0
4,421,122	-				-0.6
4,421,122	-				-1.5
4,421,122	-				-0.3
4,421,122	-				-0.7
4,421,122	-				-0.9
4,421,122	-				+0.1
4,421,122	-				-1.7
4,421,125	+				+1.5
4,421,145	+				+0.5
4,421,145	+				+1.2
4,421,145	+				+0.5
4,421,146	-				-0.3
4,421,146	-				-0.9
4,421,146	-				+0.4
4,421,146	-				-2.6
4,421,146	-				+0.8
4,421,146	-				-0.6
4,421,146	-				-0.7
4,421,146	-				-0.5
4,421,156	+				+1.5
4,421,157	-				-0.3
4,421,162	-				+0.1
4,421,221	+				-0.4
4,421,221	+				+1.6
4,421,222	-				+0.7
4,421,222	-				+0.4
4,421,222	-				+0.4
4,421,290	+		Pf6N2E2_3795	0.12	+0.0
4,421,290	+		Pf6N2E2_3795	0.12	+0.6
4,421,290	+		Pf6N2E2_3795	0.12	-1.3
4,421,290	+		Pf6N2E2_3795	0.12	+0.2
4,421,290	+		Pf6N2E2_3795	0.12	-0.1
4,421,291	-		Pf6N2E2_3795	0.12	-0.5
4,421,291	-		Pf6N2E2_3795	0.12	+1.0
4,421,291	-		Pf6N2E2_3795	0.12	+1.3
4,421,291	-		Pf6N2E2_3795	0.12	+0.1
4,421,333	-		Pf6N2E2_3795	0.16	+0.7
4,421,428	+		Pf6N2E2_3795	0.27	-0.5
4,421,428	+		Pf6N2E2_3795	0.27	-0.6
4,421,429	-		Pf6N2E2_3795	0.27	+0.2
4,421,429	-		Pf6N2E2_3795	0.27	-1.4
4,421,455	+		Pf6N2E2_3795	0.30	-0.4
4,421,610	+		Pf6N2E2_3795	0.47	+0.6
4,421,908	+		Pf6N2E2_3795	0.79	+0.7
4,421,908	+		Pf6N2E2_3795	0.79	+1.1
4,421,909	-		Pf6N2E2_3795	0.79	-1.9