Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3664

Experiment: Rifampicin 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.003 mg/ml
4,264,426	+				+11.3
4,264,427	-				+11.6
4,264,427	-				+11.4
4,264,475	-				+11.8
4,264,475	-				+11.6
4,264,495	+		Pf6N2E2_3663	0.11	+9.6
4,264,496	-		Pf6N2E2_3663	0.12	+12.2
4,264,667	+		Pf6N2E2_3663	0.30	+11.0
4,264,668	-		Pf6N2E2_3663	0.31	+10.9
4,264,668	-		Pf6N2E2_3663	0.31	+11.1
4,264,669	+		Pf6N2E2_3663	0.31	+12.1
4,264,670	-		Pf6N2E2_3663	0.31	+10.8
4,264,670	-		Pf6N2E2_3663	0.31	+12.0
4,264,670	-		Pf6N2E2_3663	0.31	+12.7
4,264,670	-		Pf6N2E2_3663	0.31	+11.2
4,264,670	-		Pf6N2E2_3663	0.31	+11.7
4,264,670	-		Pf6N2E2_3663	0.31	+10.5
4,264,768	+		Pf6N2E2_3663	0.42	+10.7
4,264,844	-		Pf6N2E2_3663	0.50	+11.4
4,264,941	-		Pf6N2E2_3663	0.61	+11.6
4,265,032	+		Pf6N2E2_3663	0.71	+12.3
4,265,032	+		Pf6N2E2_3663	0.71	+9.6
4,265,033	-		Pf6N2E2_3663	0.71	+11.6
4,265,033	-		Pf6N2E2_3663	0.71	+10.2
4,265,033	-		Pf6N2E2_3663	0.71	+10.9
4,265,033	-		Pf6N2E2_3663	0.71	+11.6
4,265,033	-		Pf6N2E2_3663	0.71	+11.8
4,265,033	-		Pf6N2E2_3663	0.71	+11.3
4,265,033	-		Pf6N2E2_3663	0.71	+11.0
4,265,033	-		Pf6N2E2_3663	0.71	+11.2
4,265,033	-		Pf6N2E2_3663	0.71	+11.2
4,265,033	-		Pf6N2E2_3663	0.71	+11.1
4,265,063	+		Pf6N2E2_3663	0.74	+9.8
4,265,252	-				+11.5
4,265,252	-				+11.4
4,265,255	+				+12.0
4,265,255	+				+10.1
4,265,256	-				+11.6
4,265,256	-				+10.6
4,265,257	+				+10.5
4,265,257	+				+10.9
4,265,257	+				+9.9
4,265,258	-				+9.7
4,265,258	-				+11.7
4,265,258	-				+11.0
4,265,258	-				+11.4
4,265,258	-				+9.9
4,265,295	-				+10.0
4,265,478	-		Pf6N2E2_3664	0.11	+5.3
4,265,481	-		Pf6N2E2_3664	0.11	+2.4
4,265,906	+		Pf6N2E2_3664	0.35	+9.1
4,265,922	-		Pf6N2E2_3664	0.36	+7.8
4,265,969	+		Pf6N2E2_3664	0.39	+9.5
4,265,969	+		Pf6N2E2_3664	0.39	+9.1
4,265,969	+		Pf6N2E2_3664	0.39	+8.0
4,265,970	-		Pf6N2E2_3664	0.39	+9.5
4,265,970	-		Pf6N2E2_3664	0.39	+9.4
4,265,970	-		Pf6N2E2_3664	0.39	+8.8
4,265,970	-		Pf6N2E2_3664	0.39	+7.4
4,265,970	-		Pf6N2E2_3664	0.39	+8.9
4,265,970	-		Pf6N2E2_3664	0.39	+7.9
4,265,970	-		Pf6N2E2_3664	0.39	+8.7
4,265,970	-		Pf6N2E2_3664	0.39	+9.3
4,265,970	-		Pf6N2E2_3664	0.39	+9.4
4,265,970	-		Pf6N2E2_3664	0.39	+8.9
4,266,131	+		Pf6N2E2_3664	0.48	+3.1
4,266,131	+		Pf6N2E2_3664	0.48	+9.9
4,266,132	-		Pf6N2E2_3664	0.48	+7.3
4,266,198	-				+7.4
4,266,198	-		Pf6N2E2_3664	0.52	+8.4
4,266,198	-		Pf6N2E2_3664	0.52	+6.6
4,266,198	-		Pf6N2E2_3664	0.52	+8.7
4,266,198	-		Pf6N2E2_3664	0.52	+8.8
4,266,264	-		Pf6N2E2_3664	0.56	+7.2
4,266,264	-		Pf6N2E2_3664	0.56	+4.2
4,266,264	-		Pf6N2E2_3664	0.56	+7.8
4,266,264	-		Pf6N2E2_3664	0.56	+10.3
4,266,285	+		Pf6N2E2_3664	0.57	+10.6
4,266,286	-		Pf6N2E2_3664	0.57	+7.8
4,266,286	-		Pf6N2E2_3664	0.57	+8.2
4,266,288	-		Pf6N2E2_3664	0.57	+7.9
4,266,371	+		Pf6N2E2_3664	0.62	+8.6
4,266,372	-		Pf6N2E2_3664	0.62	+7.5
4,266,372	-		Pf6N2E2_3664	0.62	+6.8
4,266,372	-		Pf6N2E2_3664	0.62	+8.4
4,266,720	-		Pf6N2E2_3664	0.82	+7.9
4,266,785	+		Pf6N2E2_3664	0.86	+8.0
4,266,786	-		Pf6N2E2_3664	0.86	+7.5
4,266,929	-				+9.2
4,266,975	-				+7.0
4,266,975	-				+8.8
4,266,975	-				+9.6
4,266,975	-				+9.2
4,266,975	-				+8.2
4,266,975	-				+8.9
4,266,975	-				+9.0
4,267,043	+				+7.7
4,267,044	-				+9.6
4,267,051	+				+8.8
4,267,052	-				+7.2
4,267,052	-				+5.8
4,267,052	-				+9.5
4,267,052	-				+9.4
4,267,052	-				+8.5
4,267,052	-				+9.5
4,267,052	-				+7.6
4,267,121	-				-1.1
4,267,121	-				-0.0
4,267,135	+				+9.8
4,267,135	+				+9.2
4,267,135	+				+8.8
4,267,141	-				+0.1
4,267,141	-				+0.3
4,267,153	-				+0.1
4,267,186	+				+0.3
4,267,186	+				+0.6
4,267,187	-				-1.2
4,267,193	+				-0.7
4,267,193	+				+1.4
4,267,242	-				-0.9
4,267,343	+				+1.3
4,267,344	-				+0.5
4,267,384	-				+0.1
4,267,395	+				+0.8
4,267,980	-		Pf6N2E2_3665	0.40	-0.7