Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3566

Experiment: Rifampicin 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.003 mg/ml
4,155,901	-		Pf6N2E2_3564	0.70	-1.6
4,155,916	-		Pf6N2E2_3564	0.71	+0.3
4,155,916	-		Pf6N2E2_3564	0.71	-0.3
4,155,965	+		Pf6N2E2_3564	0.77	-0.3
4,155,965	+		Pf6N2E2_3564	0.77	-0.3
4,156,042	-		Pf6N2E2_3564	0.85	+0.7
4,156,182	+				+0.3
4,156,183	-				+1.1
4,156,183	-				+0.6
4,156,258	+				+0.4
4,156,258	+				+0.4
4,156,267	+				+0.9
4,156,268	-				+0.6
4,156,268	-				+0.8
4,156,268	-				-1.3
4,156,268	-				+0.6
4,156,268	-				+1.2
4,156,327	-		Pf6N2E2_3565	0.16	+0.6
4,156,402	-		Pf6N2E2_3565	0.30	+0.7
4,156,413	+		Pf6N2E2_3565	0.32	-0.1
4,156,413	+		Pf6N2E2_3565	0.32	-0.0
4,156,414	-		Pf6N2E2_3565	0.32	-1.5
4,156,414	-		Pf6N2E2_3565	0.32	-0.2
4,156,414	-		Pf6N2E2_3565	0.32	+0.8
4,156,578	+		Pf6N2E2_3565	0.63	+0.2
4,156,578	+		Pf6N2E2_3565	0.63	+0.2
4,156,578	+		Pf6N2E2_3565	0.63	-2.6
4,156,578	+		Pf6N2E2_3565	0.63	+0.2
4,156,578	+		Pf6N2E2_3565	0.63	+1.6
4,156,578	+		Pf6N2E2_3565	0.63	+0.6
4,156,579	-		Pf6N2E2_3565	0.63	+1.5
4,156,611	+		Pf6N2E2_3565	0.69	-0.9
4,156,611	+		Pf6N2E2_3565	0.69	+0.1
4,156,611	+		Pf6N2E2_3565	0.69	-0.6
4,156,612	-		Pf6N2E2_3565	0.70	+0.1
4,156,612	-		Pf6N2E2_3565	0.70	+0.5
4,156,612	-		Pf6N2E2_3565	0.70	-0.8
4,156,668	+		Pf6N2E2_3565	0.80	-0.7
4,156,668	+		Pf6N2E2_3565	0.80	-0.4
4,156,668	+		Pf6N2E2_3565	0.80	+0.7
4,156,668	+		Pf6N2E2_3565	0.80	-1.8
4,156,668	+		Pf6N2E2_3565	0.80	+0.9
4,156,668	+		Pf6N2E2_3565	0.80	+0.5
4,156,669	-		Pf6N2E2_3565	0.80	-0.8
4,156,773	+				+0.5
4,156,774	-				-1.4
4,156,779	+				+0.5
4,156,779	+				+1.4
4,156,779	+				-0.5
4,156,780	-				+0.2
4,156,785	+				-0.1
4,157,102	+		Pf6N2E2_3566	0.10	+0.4
4,157,103	-		Pf6N2E2_3566	0.11	+0.3
4,157,103	-		Pf6N2E2_3566	0.11	+0.7
4,157,103	-		Pf6N2E2_3566	0.11	-0.1
4,157,103	-		Pf6N2E2_3566	0.11	-0.3
4,157,103	-		Pf6N2E2_3566	0.11	-0.1
4,157,103	-		Pf6N2E2_3566	0.11	-0.1
4,157,103	-		Pf6N2E2_3566	0.11	-0.3
4,157,103	-		Pf6N2E2_3566	0.11	-0.8
4,157,103	-		Pf6N2E2_3566	0.11	-1.6
4,157,201	+		Pf6N2E2_3566	0.15	-0.5
4,157,201	+		Pf6N2E2_3566	0.15	-0.5
4,157,202	-		Pf6N2E2_3566	0.15	-0.0
4,157,202	-		Pf6N2E2_3566	0.15	-1.7
4,157,202	-		Pf6N2E2_3566	0.15	+0.7
4,157,202	-		Pf6N2E2_3566	0.15	+0.2
4,157,202	-		Pf6N2E2_3566	0.15	-0.2
4,157,202	-		Pf6N2E2_3566	0.15	-0.1
4,157,202	-		Pf6N2E2_3566	0.15	+0.9
4,157,327	+		Pf6N2E2_3566	0.21	-0.7
4,157,327	+		Pf6N2E2_3566	0.21	+0.6
4,157,327	+		Pf6N2E2_3566	0.21	+0.8
4,157,327	+		Pf6N2E2_3566	0.21	+0.5
4,157,327	+		Pf6N2E2_3566	0.21	-0.3
4,157,328	-		Pf6N2E2_3566	0.21	-1.3
4,157,328	-		Pf6N2E2_3566	0.21	+0.1
4,157,328	-		Pf6N2E2_3566	0.21	+0.4
4,157,328	-		Pf6N2E2_3566	0.21	+0.1
4,157,670	+		Pf6N2E2_3566	0.38	+0.9
4,157,671	-		Pf6N2E2_3566	0.38	+0.9
4,157,671	-		Pf6N2E2_3566	0.38	+0.0
4,157,671	-		Pf6N2E2_3566	0.38	-0.5
4,157,671	-		Pf6N2E2_3566	0.38	-1.3
4,157,671	-		Pf6N2E2_3566	0.38	-0.5
4,157,671	-		Pf6N2E2_3566	0.38	-1.1
4,157,672	+		Pf6N2E2_3566	0.38	-0.3
4,157,672	+		Pf6N2E2_3566	0.38	+0.7
4,157,672	+		Pf6N2E2_3566	0.38	+1.0
4,157,672	+		Pf6N2E2_3566	0.38	-0.4
4,157,672	+		Pf6N2E2_3566	0.38	+0.7
4,157,672	+		Pf6N2E2_3566	0.38	+0.1
4,157,672	+		Pf6N2E2_3566	0.38	-0.1
4,157,673	-		Pf6N2E2_3566	0.38	-0.8
4,157,673	-		Pf6N2E2_3566	0.38	+1.0
4,157,673	-		Pf6N2E2_3566	0.38	+0.2
4,157,673	-		Pf6N2E2_3566	0.38	+0.5
4,157,673	-		Pf6N2E2_3566	0.38	+0.3
4,157,673	-		Pf6N2E2_3566	0.38	+0.6
4,157,700	+		Pf6N2E2_3566	0.39	+0.0
4,157,930	+		Pf6N2E2_3566	0.50	-0.4
4,157,930	+		Pf6N2E2_3566	0.50	+0.5
4,157,930	+		Pf6N2E2_3566	0.50	+0.1
4,157,930	+		Pf6N2E2_3566	0.50	-0.4
4,157,930	+		Pf6N2E2_3566	0.50	-0.4
4,157,931	-		Pf6N2E2_3566	0.50	-0.2
4,157,931	-		Pf6N2E2_3566	0.50	-0.3
4,157,931	-		Pf6N2E2_3566	0.50	-0.1
4,157,949	+		Pf6N2E2_3566	0.51	+0.1
4,158,284	+		Pf6N2E2_3566	0.67	-0.1
4,158,284	+		Pf6N2E2_3566	0.67	+0.5
4,158,284	+		Pf6N2E2_3566	0.67	-0.5
4,158,284	+		Pf6N2E2_3566	0.67	-1.0
4,158,285	-		Pf6N2E2_3566	0.67	+0.8
4,158,315	-		Pf6N2E2_3566	0.69	+1.9
4,158,416	+		Pf6N2E2_3566	0.74	-0.5
4,158,417	-		Pf6N2E2_3566	0.74	+0.5
4,158,417	-		Pf6N2E2_3566	0.74	+0.6
4,158,417	-		Pf6N2E2_3566	0.74	-0.5
4,158,417	-		Pf6N2E2_3566	0.74	+0.6
4,158,417	-		Pf6N2E2_3566	0.74	-0.3
4,158,649	+		Pf6N2E2_3566	0.85	+1.6
4,158,649	+		Pf6N2E2_3566	0.85	-0.3
4,158,649	+		Pf6N2E2_3566	0.85	+0.3
4,159,036	+				-0.9
4,159,037	-				+1.2
4,159,098	+				-1.3
4,159,143	+				+0.1
4,159,144	-				+0.3
4,159,144	-				+0.4
4,159,144	-				-1.6
4,159,144	-				-1.2
4,159,144	-				+1.4
4,159,144	-				+1.5
4,159,167	+				-0.6
4,159,168	-				-0.4
4,159,168	-				-0.2
4,159,210	-				-0.5
4,159,245	-				+0.2
4,159,247	+				-1.6
4,159,248	-				+0.3
4,159,248	-				+1.7
4,159,269	+				+1.0
4,159,270	-				+0.2
4,159,288	+				+0.4
4,159,289	-				-1.4
4,159,289	-				-0.5
4,159,289	-				+0.4
4,159,350	+				+0.4
4,159,350	+				+0.0
4,159,350	+				-0.4
4,159,351	-				-0.1
4,159,418	-		Pf6N2E2_3567	0.19	+1.4
4,159,448	+		Pf6N2E2_3567	0.27	+0.9
4,159,449	-		Pf6N2E2_3567	0.27	-0.5
4,159,514	+		Pf6N2E2_3567	0.42	-1.1
4,159,684	+		Pf6N2E2_3567	0.83	-1.9
4,159,685	-		Pf6N2E2_3567	0.83	+0.9
4,159,872	+				+0.2
4,159,872	+				-0.7
4,159,873	-				-0.9
4,159,873	-				-2.2
4,159,873	-				+0.4
4,159,873	-				-1.2