Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3389

Experiment: Rifampicin 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.003 mg/ml
3,921,084	+		Pf6N2E2_3388	0.35	-0.2
3,921,084	+		Pf6N2E2_3388	0.35	+0.1
3,921,383	+		Pf6N2E2_3388	0.66	-0.0
3,921,383	+		Pf6N2E2_3388	0.66	-0.2
3,921,383	+		Pf6N2E2_3388	0.66	+0.3
3,921,383	+		Pf6N2E2_3388	0.66	+0.7
3,921,384	-		Pf6N2E2_3388	0.66	-0.0
3,921,484	-		Pf6N2E2_3388	0.76	-0.6
3,921,494	+		Pf6N2E2_3388	0.77	+1.1
3,921,494	+		Pf6N2E2_3388	0.77	+0.6
3,921,656	+				+0.2
3,921,656	+				+0.2
3,921,657	-				-0.1
3,921,657	-				-0.3
3,921,657	-				+0.2
3,921,657	-				-1.3
3,921,685	-				-0.1
3,921,736	+				-1.8
3,921,736	+				-0.1
3,921,736	+				+1.0
3,921,736	+				-0.9
3,921,736	+				-0.9
3,921,737	-				-0.4
3,921,740	+				+0.1
3,921,740	+				+1.7
3,921,740	+				+0.7
3,921,740	+				-0.6
3,921,740	+				+0.5
3,921,740	+				-1.4
3,921,741	-				+0.2
3,921,741	-				-0.4
3,921,741	-				-0.7
3,921,741	-				-0.1
3,921,741	-				-1.0
3,921,741	-				+0.4
3,921,741	-				+0.4
3,921,741	-				-2.9
3,921,773	+				+0.3
3,921,773	+				-0.3
3,921,773	+				+1.1
3,921,774	-				+0.1
3,921,774	-				+1.0
3,921,774	-				-1.3
3,921,774	-				+1.3
3,921,832	-				-1.3
3,921,832	-				+0.7
3,921,887	-				-0.3
3,921,892	+				+1.1
3,921,892	+				-0.2
3,921,892	+				-0.1
3,921,892	+				-0.5
3,921,892	+				+0.2
3,921,893	-				+2.0
3,921,974	-				+3.9
3,922,024	+				+1.1
3,922,024	+				-0.3
3,922,024	+				+0.8
3,922,024	+				-0.3
3,922,024	+				+0.6
3,922,025	-				-0.1
3,922,028	+				+0.3
3,922,028	+				-0.6
3,922,140	-				-0.4
3,922,140	-				+1.9
3,922,140	-				-0.2
3,922,178	+		Pf6N2E2_3389	0.10	+0.9
3,922,288	+		Pf6N2E2_3389	0.19	-0.5
3,922,288	+		Pf6N2E2_3389	0.19	-0.6
3,922,289	-		Pf6N2E2_3389	0.19	-0.4
3,922,289	-		Pf6N2E2_3389	0.19	-1.1
3,922,289	-		Pf6N2E2_3389	0.19	+0.5
3,922,289	-		Pf6N2E2_3389	0.19	-0.2
3,922,289	-		Pf6N2E2_3389	0.19	-0.1
3,922,289	-		Pf6N2E2_3389	0.19	+0.2
3,922,320	-		Pf6N2E2_3389	0.21	-0.2
3,922,333	-		Pf6N2E2_3389	0.22	+0.1
3,922,350	+		Pf6N2E2_3389	0.23	-0.2
3,922,414	-		Pf6N2E2_3389	0.28	+0.7
3,922,454	+		Pf6N2E2_3389	0.31	-0.9
3,922,464	+		Pf6N2E2_3389	0.32	+0.4
3,922,464	+		Pf6N2E2_3389	0.32	+0.4
3,922,464	+		Pf6N2E2_3389	0.32	-1.5
3,922,464	+		Pf6N2E2_3389	0.32	-0.6
3,922,464	+		Pf6N2E2_3389	0.32	-0.2
3,922,464	+		Pf6N2E2_3389	0.32	+0.4
3,922,464	+		Pf6N2E2_3389	0.32	+0.6
3,922,464	+		Pf6N2E2_3389	0.32	+0.4
3,922,465	-		Pf6N2E2_3389	0.32	-0.1
3,922,465	-		Pf6N2E2_3389	0.32	+0.6
3,922,465	-		Pf6N2E2_3389	0.32	-0.9
3,922,465	-		Pf6N2E2_3389	0.32	+0.5
3,922,465	-		Pf6N2E2_3389	0.32	-0.7
3,922,465	-		Pf6N2E2_3389	0.32	-1.9
3,922,465	-		Pf6N2E2_3389	0.32	-1.1
3,922,465	-		Pf6N2E2_3389	0.32	-1.4
3,922,465	-		Pf6N2E2_3389	0.32	+0.3
3,922,465	-		Pf6N2E2_3389	0.32	+0.3
3,922,465	-		Pf6N2E2_3389	0.32	-0.6
3,922,465	-		Pf6N2E2_3389	0.32	-0.2
3,922,503	-		Pf6N2E2_3389	0.35	-0.6
3,922,512	+		Pf6N2E2_3389	0.35	+0.3
3,922,512	+		Pf6N2E2_3389	0.35	+0.4
3,922,513	-		Pf6N2E2_3389	0.35	-0.0
3,922,513	-		Pf6N2E2_3389	0.35	-0.3
3,922,621	+		Pf6N2E2_3389	0.43	+0.7
3,922,622	-		Pf6N2E2_3389	0.44	-1.4
3,922,622	-		Pf6N2E2_3389	0.44	-0.6
3,922,707	+		Pf6N2E2_3389	0.50	-0.4
3,922,707	+		Pf6N2E2_3389	0.50	-0.5
3,922,723	+		Pf6N2E2_3389	0.51	-0.7
3,922,724	-		Pf6N2E2_3389	0.51	+1.5
3,922,762	+		Pf6N2E2_3389	0.54	+0.4
3,922,762	+		Pf6N2E2_3389	0.54	-0.2
3,922,762	+		Pf6N2E2_3389	0.54	-0.7
3,922,762	+		Pf6N2E2_3389	0.54	-0.6
3,922,763	-		Pf6N2E2_3389	0.54	+0.1
3,922,769	+		Pf6N2E2_3389	0.55	-0.7
3,922,782	+		Pf6N2E2_3389	0.55	+0.1
3,922,783	-				+3.1
3,922,862	+		Pf6N2E2_3389	0.61	+0.1
3,922,863	-		Pf6N2E2_3389	0.62	-0.3
3,922,919	+		Pf6N2E2_3389	0.66	+0.1
3,923,045	+		Pf6N2E2_3389	0.75	+0.3
3,923,045	+		Pf6N2E2_3389	0.75	-0.2
3,923,045	+		Pf6N2E2_3389	0.75	+0.5
3,923,045	+		Pf6N2E2_3389	0.75	-2.4
3,923,045	+		Pf6N2E2_3389	0.75	-0.2
3,923,045	+		Pf6N2E2_3389	0.75	-0.1
3,923,046	-		Pf6N2E2_3389	0.75	-1.1
3,923,046	-		Pf6N2E2_3389	0.75	-1.3
3,923,046	-		Pf6N2E2_3389	0.75	+0.1
3,923,046	-		Pf6N2E2_3389	0.75	-1.3
3,923,046	-		Pf6N2E2_3389	0.75	-0.0
3,923,186	+		Pf6N2E2_3389	0.86	-0.5
3,923,186	+		Pf6N2E2_3389	0.86	+0.1
3,923,187	-		Pf6N2E2_3389	0.86	-0.1
3,923,187	-		Pf6N2E2_3389	0.86	-0.4
3,923,187	-		Pf6N2E2_3389	0.86	+0.2
3,923,187	-		Pf6N2E2_3389	0.86	+0.6
3,923,190	+		Pf6N2E2_3389	0.86	+3.1
3,923,190	+		Pf6N2E2_3389	0.86	-0.3
3,923,190	+		Pf6N2E2_3389	0.86	-0.4
3,923,190	+		Pf6N2E2_3389	0.86	+0.9
3,923,191	+		Pf6N2E2_3389	0.86	-0.3
3,923,191	-		Pf6N2E2_3389	0.86	-0.0
3,923,194	+		Pf6N2E2_3389	0.86	-0.1
3,923,209	+		Pf6N2E2_3389	0.87	-0.5
3,923,210	-		Pf6N2E2_3389	0.87	-1.6
3,923,433	+				+4.1
3,923,434	-				+0.7
3,923,434	-				-0.9
3,923,434	-				+0.9
3,923,434	-				-0.0
3,923,481	-				-0.1
3,923,481	-				+0.8
3,923,567	+				-0.2
3,923,610	+				+0.7
3,923,611	-				+0.4
3,923,836	+				+0.1
3,923,837	-				+0.7
3,923,973	+				+0.7
3,923,974	-				-0.3
3,923,990	+				+2.1
3,923,990	+				+0.1
3,923,990	+				+0.9
3,924,036	+				+0.6
3,924,073	+				+0.3
3,924,074	-				+0.7
3,924,079	+				-0.8
3,924,138	+				-1.4
3,924,138	+				-0.9
3,924,139	-				-0.4
3,924,140	+				-0.2
3,924,140	+				+0.8
3,924,140	+				-0.4
3,924,141	-				+0.3
3,924,141	-				-1.0
3,924,141	-				+0.1
3,924,233	+				-0.3
3,924,233	+				+0.8
3,924,233	+				+0.1
3,924,234	-				+1.0
3,924,234	-				-1.0
3,924,234	-				-1.8
3,924,268	+				-0.4
3,924,268	+				-0.6
3,924,269	-				-0.1
3,924,269	-				-0.4
3,924,269	-				+0.3
3,924,272	+				-0.3
3,924,272	+				+0.1
3,924,272	+				-1.2
3,924,272	+				-0.2
3,924,272	+				-0.9
3,924,272	+				-1.1
3,924,272	+				-0.1
3,924,272	+				-0.7
3,924,272	+				-0.0
3,924,272	+				+0.0
3,924,272	+				+0.5
3,924,272	+				-0.1
3,924,272	+				+0.3
3,924,272	+				-0.3
3,924,272	+				+1.0
3,924,272	+				+1.0
3,924,272	+				-0.7
3,924,273	-				+0.2
3,924,273	-				+0.0
3,924,273	-				+0.1
3,924,273	-				-0.3
3,924,273	-				+0.8
3,924,273	-				-1.0
3,924,273	-				-1.1
3,924,273	-				+0.8
3,924,273	-				-2.4
3,924,273	-				-0.2
3,924,273	-				+0.2
3,924,273	-				-1.7
3,924,273	-				+0.1
3,924,273	-				+0.1
3,924,273	-				-1.1
3,924,273	-				-0.9
3,924,273	-				+0.5
3,924,273	-				-1.6
3,924,274	+				+0.1
3,924,275	-				-0.7
3,924,275	-				+1.8
3,924,345	+				+0.1
3,924,345	+				+0.1
3,924,346	-				-0.8
3,924,346	-				-1.9
3,924,346	-				+0.2
3,924,346	-				+0.6
3,924,346	-				-0.3
3,924,346	-				-0.2