Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3308

Experiment: Rifampicin 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.003 mg/ml
3,819,823	+		Pf6N2E2_3307	0.66	+0.8
3,819,823	+		Pf6N2E2_3307	0.66	+0.2
3,819,916	+		Pf6N2E2_3307	0.72	-0.5
3,819,917	-		Pf6N2E2_3307	0.72	-1.4
3,819,917	-		Pf6N2E2_3307	0.72	+0.3
3,819,917	-		Pf6N2E2_3307	0.72	+0.0
3,819,997	+		Pf6N2E2_3307	0.77	+0.1
3,819,997	+		Pf6N2E2_3307	0.77	-0.0
3,820,012	+		Pf6N2E2_3307	0.78	+1.0
3,820,012	+		Pf6N2E2_3307	0.78	+0.1
3,820,013	-		Pf6N2E2_3307	0.78	+0.8
3,820,013	-		Pf6N2E2_3307	0.78	-0.1
3,820,219	+				-0.0
3,820,219	+				-0.2
3,820,219	+				-0.2
3,820,219	+				+0.2
3,820,220	-				+0.9
3,820,266	+				-1.0
3,820,266	+				+0.7
3,820,266	+				-0.1
3,820,266	+				+0.2
3,820,267	-				+0.8
3,820,267	-				+0.7
3,820,285	+				+1.1
3,820,285	+				+0.7
3,820,285	+				-0.0
3,820,285	+				-1.2
3,820,285	+				+0.6
3,820,285	+				+1.2
3,820,286	-				+0.3
3,820,286	-				-0.3
3,820,349	-				+0.3
3,820,369	+				+1.4
3,820,369	+				+1.8
3,820,369	+				+0.7
3,820,369	+				+1.3
3,820,369	+				-0.1
3,820,369	+				+1.1
3,820,370	-				-0.7
3,820,370	-				-1.8
3,820,370	-				-1.5
3,820,370	-				+0.9
3,820,370	-				-0.7
3,820,413	-				+0.5
3,820,444	+				-0.3
3,820,444	+				+0.9
3,820,444	+				-0.0
3,820,444	+				+0.1
3,820,444	+				+0.6
3,820,445	-				-0.4
3,820,496	+				-0.0
3,820,521	-				+0.2
3,820,539	+				+0.6
3,820,540	-				+0.5
3,820,557	-				+0.7
3,820,602	+				-0.9
3,820,602	+				+1.2
3,820,603	-				-1.3
3,820,624	-				-0.3
3,820,721	+				+0.4
3,820,722	-				+0.3
3,820,722	-				+0.2
3,820,722	-				-0.4
3,820,760	-				-0.5
3,820,883	+				-0.4
3,820,883	+				-1.5
3,820,883	+				+0.6
3,820,884	-				-0.1
3,820,884	-				-0.4
3,821,012	+		Pf6N2E2_3308	0.16	-0.5
3,821,013	-		Pf6N2E2_3308	0.16	+1.4
3,821,057	+		Pf6N2E2_3308	0.19	+2.2
3,821,057	+		Pf6N2E2_3308	0.19	-1.0
3,821,058	-		Pf6N2E2_3308	0.19	-0.9
3,821,165	+		Pf6N2E2_3308	0.26	-0.4
3,821,166	-		Pf6N2E2_3308	0.26	-1.3
3,821,166	-		Pf6N2E2_3308	0.26	-0.6
3,821,166	-		Pf6N2E2_3308	0.26	+1.2
3,821,393	+		Pf6N2E2_3308	0.40	-0.4
3,821,394	-		Pf6N2E2_3308	0.40	-1.2
3,821,394	-		Pf6N2E2_3308	0.40	-0.8
3,821,394	-		Pf6N2E2_3308	0.40	-0.1
3,821,436	-		Pf6N2E2_3308	0.43	-1.7
3,821,436	-		Pf6N2E2_3308	0.43	+1.3
3,821,562	+		Pf6N2E2_3308	0.51	-0.2
3,821,563	-		Pf6N2E2_3308	0.51	-1.2
3,821,563	-		Pf6N2E2_3308	0.51	-2.5
3,821,625	-		Pf6N2E2_3308	0.55	-0.3
3,821,625	-		Pf6N2E2_3308	0.55	-1.0
3,821,633	+		Pf6N2E2_3308	0.55	+0.3
3,821,633	+		Pf6N2E2_3308	0.55	-1.3
3,821,633	+		Pf6N2E2_3308	0.55	+1.3
3,821,633	+		Pf6N2E2_3308	0.55	+0.5
3,821,633	+		Pf6N2E2_3308	0.55	+0.6
3,821,633	+		Pf6N2E2_3308	0.55	+0.0
3,821,634	-		Pf6N2E2_3308	0.55	+1.0
3,821,634	-		Pf6N2E2_3308	0.55	-1.4
3,821,635	+		Pf6N2E2_3308	0.55	+0.7
3,821,635	+		Pf6N2E2_3308	0.55	+0.2
3,821,635	+		Pf6N2E2_3308	0.55	-0.4
3,821,636	-		Pf6N2E2_3308	0.55	+1.3
3,821,636	-		Pf6N2E2_3308	0.55	+1.4
3,821,636	-		Pf6N2E2_3308	0.55	+0.2
3,821,636	-		Pf6N2E2_3308	0.55	-0.9
3,821,724	-		Pf6N2E2_3308	0.61	-0.6
3,821,777	+		Pf6N2E2_3308	0.64	-0.0
3,821,804	+		Pf6N2E2_3308	0.66	+0.1
3,821,804	+		Pf6N2E2_3308	0.66	-0.6
3,821,804	+		Pf6N2E2_3308	0.66	-0.1
3,821,804	+		Pf6N2E2_3308	0.66	-0.3
3,821,805	-		Pf6N2E2_3308	0.66	+0.8
3,821,897	+		Pf6N2E2_3308	0.72	+0.2
3,821,898	-		Pf6N2E2_3308	0.72	-1.7
3,821,898	-		Pf6N2E2_3308	0.72	+0.2
3,821,979	-		Pf6N2E2_3308	0.77	+0.6
3,821,993	+		Pf6N2E2_3308	0.78	+1.1
3,821,993	+		Pf6N2E2_3308	0.78	+1.5
3,821,993	+		Pf6N2E2_3308	0.78	+0.8
3,821,994	-		Pf6N2E2_3308	0.78	-1.2
3,821,994	-		Pf6N2E2_3308	0.78	+0.6
3,821,994	-		Pf6N2E2_3308	0.78	+0.7
3,821,994	-		Pf6N2E2_3308	0.78	+0.5
3,821,994	-		Pf6N2E2_3308	0.78	-0.0
3,822,086	+		Pf6N2E2_3308	0.83	+0.6
3,822,086	+		Pf6N2E2_3308	0.83	+1.0
3,822,116	+		Pf6N2E2_3308	0.85	+0.5
3,822,116	+		Pf6N2E2_3308	0.85	+0.6
3,822,116	+		Pf6N2E2_3308	0.85	+1.7
3,822,117	-		Pf6N2E2_3308	0.85	+0.4
3,822,117	-		Pf6N2E2_3308	0.85	+0.1
3,822,140	+		Pf6N2E2_3308	0.87	+1.3
3,822,200	+				+0.9
3,822,460	-				-1.7
3,822,545	-				+0.2
3,822,583	-				+0.4
3,822,662	-		Pf6N2E2_3309	0.10	-1.1
3,822,662	-		Pf6N2E2_3309	0.10	-0.5
3,822,700	-		Pf6N2E2_3309	0.13	-0.4
3,822,726	-		Pf6N2E2_3309	0.15	-1.5
3,822,738	+		Pf6N2E2_3309	0.16	+1.0
3,822,739	-		Pf6N2E2_3309	0.16	+0.2
3,822,739	-		Pf6N2E2_3309	0.16	-0.7
3,822,739	-		Pf6N2E2_3309	0.16	+1.1
3,822,807	+		Pf6N2E2_3309	0.21	-1.1
3,822,808	-		Pf6N2E2_3309	0.21	-0.9
3,822,808	-		Pf6N2E2_3309	0.21	+0.0
3,822,808	-		Pf6N2E2_3309	0.21	+0.0
3,822,830	+		Pf6N2E2_3309	0.22	+0.2
3,822,831	-		Pf6N2E2_3309	0.22	-0.4
3,822,861	+		Pf6N2E2_3309	0.25	-0.7
3,822,862	-		Pf6N2E2_3309	0.25	-0.4
3,823,243	-		Pf6N2E2_3309	0.52	-2.2
3,823,243	-		Pf6N2E2_3309	0.52	+0.2
3,823,308	+		Pf6N2E2_3309	0.57	-0.8
3,823,309	-		Pf6N2E2_3309	0.57	-0.0
3,823,311	+		Pf6N2E2_3309	0.57	+0.0
3,823,312	-		Pf6N2E2_3309	0.57	-0.7
3,823,312	-		Pf6N2E2_3309	0.57	-1.0
3,823,312	-		Pf6N2E2_3309	0.57	-0.3
3,823,330	+		Pf6N2E2_3309	0.59	+0.2
3,823,331	-		Pf6N2E2_3309	0.59	-0.3
3,823,331	-		Pf6N2E2_3309	0.59	+0.2
3,823,331	-		Pf6N2E2_3309	0.59	+0.3