Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2934

Experiment: Rifampicin 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.003 mg/ml
3,424,047	+		Pf6N2E2_2932	0.56	-0.4
3,424,048	-		Pf6N2E2_2932	0.56	-0.9
3,424,048	-		Pf6N2E2_2932	0.56	-1.3
3,424,176	+		Pf6N2E2_2932	0.78	-0.8
3,424,176	+		Pf6N2E2_2932	0.78	-0.3
3,424,177	-		Pf6N2E2_2932	0.78	+0.4
3,424,199	+		Pf6N2E2_2932	0.81	-0.4
3,424,199	+		Pf6N2E2_2932	0.81	+0.2
3,424,199	+		Pf6N2E2_2932	0.81	-0.6
3,424,199	+		Pf6N2E2_2932	0.81	-0.1
3,424,199	+		Pf6N2E2_2932	0.81	+0.1
3,424,199	+		Pf6N2E2_2932	0.81	-0.3
3,424,200	-		Pf6N2E2_2932	0.82	+0.3
3,424,200	-		Pf6N2E2_2932	0.82	-0.0
3,424,200	-		Pf6N2E2_2932	0.82	+1.1
3,424,200	-		Pf6N2E2_2932	0.82	+0.5
3,424,200	-		Pf6N2E2_2932	0.82	-0.3
3,424,200	-		Pf6N2E2_2932	0.82	+0.1
3,424,200	-		Pf6N2E2_2932	0.82	-0.5
3,424,200	-		Pf6N2E2_2932	0.82	-0.8
3,424,200	-		Pf6N2E2_2932	0.82	-1.8
3,424,200	-		Pf6N2E2_2932	0.82	-0.7
3,424,200	-		Pf6N2E2_2932	0.82	-0.7
3,424,208	+		Pf6N2E2_2932	0.83	+0.4
3,424,208	+		Pf6N2E2_2932	0.83	-0.1
3,424,209	-		Pf6N2E2_2932	0.83	+0.6
3,424,209	-		Pf6N2E2_2932	0.83	-0.8
3,424,209	-		Pf6N2E2_2932	0.83	-1.3
3,424,209	-		Pf6N2E2_2932	0.83	-0.2
3,424,295	+				-0.8
3,424,296	-				+0.8
3,424,296	-				+0.6
3,424,406	-		Pf6N2E2_2933	0.19	+0.4
3,424,406	-		Pf6N2E2_2933	0.19	-0.4
3,424,472	+		Pf6N2E2_2933	0.39	+0.7
3,424,472	+		Pf6N2E2_2933	0.39	-1.2
3,424,638	+		Pf6N2E2_2933	0.90	+0.3
3,424,710	+				+4.9
3,424,721	+				-1.3
3,424,743	+				-0.8
3,424,744	-				+0.3
3,424,788	+				-0.5
3,424,788	+				-0.6
3,424,834	+				-0.4
3,424,834	+				-0.8
3,424,834	+				+1.1
3,424,835	-				+0.4
3,424,835	-				+0.4
3,424,835	-				+0.2
3,424,839	+				-0.7
3,424,839	+				+0.1
3,424,839	+				-1.3
3,424,839	+				+1.7
3,424,839	+				+1.0
3,424,839	+				+0.1
3,424,839	+				-0.1
3,424,840	-				+0.9
3,424,840	-				-1.1
3,425,060	+		Pf6N2E2_2934	0.26	-1.0
3,425,060	+		Pf6N2E2_2934	0.26	-0.2
3,425,211	-		Pf6N2E2_2934	0.48	-1.0
3,425,364	-		Pf6N2E2_2934	0.71	+0.4
3,425,364	-		Pf6N2E2_2934	0.71	-0.8
3,425,583	+				+0.8
3,425,584	-				-0.2
3,425,584	-				-0.2
3,425,599	+				-0.1
3,425,600	-				-0.1
3,425,600	-				+1.4
3,425,622	+				+0.3
3,425,623	-				+0.3
3,425,624	+				-0.2
3,425,624	+				-0.0
3,425,624	+				-0.3
3,425,624	+				-0.4
3,425,686	+				-0.8
3,425,808	+				+0.7
3,425,847	+		Pf6N2E2_2935	0.10	-0.5
3,425,847	+		Pf6N2E2_2935	0.10	-0.2
3,425,847	+		Pf6N2E2_2935	0.10	+1.6
3,425,848	-		Pf6N2E2_2935	0.10	-0.7
3,425,848	-		Pf6N2E2_2935	0.10	+0.7
3,425,848	-		Pf6N2E2_2935	0.10	-0.2
3,425,848	-		Pf6N2E2_2935	0.10	-2.1
3,425,937	+		Pf6N2E2_2935	0.16	+0.1
3,425,937	+		Pf6N2E2_2935	0.16	-0.1
3,425,938	-		Pf6N2E2_2935	0.16	+0.1
3,425,947	+		Pf6N2E2_2935	0.16	-1.2
3,425,948	-		Pf6N2E2_2935	0.16	+0.2
3,426,086	+		Pf6N2E2_2935	0.25	-0.4
3,426,189	+		Pf6N2E2_2935	0.31	+0.2
3,426,190	-		Pf6N2E2_2935	0.31	+0.1
3,426,273	+		Pf6N2E2_2935	0.37	+0.6
3,426,273	+		Pf6N2E2_2935	0.37	+0.1
3,426,274	-		Pf6N2E2_2935	0.37	+0.4
3,426,274	-		Pf6N2E2_2935	0.37	-2.3
3,426,274	-		Pf6N2E2_2935	0.37	-0.1
3,426,361	+		Pf6N2E2_2935	0.42	+1.0
3,426,361	+		Pf6N2E2_2935	0.42	-1.2
3,426,362	-		Pf6N2E2_2935	0.42	-2.2
3,426,519	+		Pf6N2E2_2935	0.52	+0.2
3,426,519	+		Pf6N2E2_2935	0.52	+0.6
3,426,520	-		Pf6N2E2_2935	0.52	+0.5
3,426,520	-		Pf6N2E2_2935	0.52	+0.8
3,426,520	-		Pf6N2E2_2935	0.52	-1.5
3,426,520	-		Pf6N2E2_2935	0.52	-0.1
3,426,520	-		Pf6N2E2_2935	0.52	-0.4
3,426,520	-		Pf6N2E2_2935	0.52	+0.9
3,426,520	-		Pf6N2E2_2935	0.52	+1.0
3,426,520	-		Pf6N2E2_2935	0.52	-0.7