Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2735

Experiment: Rifampicin 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.003 mg/ml
3,225,572	-		Pf6N2E2_2734	0.19	-0.7
3,225,573	+		Pf6N2E2_2734	0.20	+0.4
3,225,574	-		Pf6N2E2_2734	0.20	+1.3
3,225,744	+		Pf6N2E2_2734	0.38	+0.9
3,225,745	-		Pf6N2E2_2734	0.38	-0.3
3,226,349	+				-0.5
3,226,349	+				-0.6
3,226,349	+				+1.0
3,226,349	+				-1.7
3,226,350	-				-0.2
3,226,373	+				+0.2
3,226,403	+				+0.1
3,226,403	+				-2.5
3,226,403	+				+4.1
3,226,403	+				-0.6
3,226,545	-				+0.3
3,226,782	+		Pf6N2E2_2735	0.11	-0.0
3,226,783	-		Pf6N2E2_2735	0.11	+0.6
3,227,120	+		Pf6N2E2_2735	0.28	-0.5
3,227,121	-		Pf6N2E2_2735	0.28	-0.9
3,227,121	-		Pf6N2E2_2735	0.28	-1.1
3,227,121	-		Pf6N2E2_2735	0.28	+0.3
3,227,138	+		Pf6N2E2_2735	0.28	-1.0
3,227,138	+		Pf6N2E2_2735	0.28	-0.4
3,227,139	-		Pf6N2E2_2735	0.29	-0.2
3,227,213	+		Pf6N2E2_2735	0.32	-0.8
3,227,214	-		Pf6N2E2_2735	0.32	-0.6
3,227,214	-		Pf6N2E2_2735	0.32	-0.2
3,227,249	+		Pf6N2E2_2735	0.34	-0.2
3,227,249	+		Pf6N2E2_2735	0.34	-1.9
3,227,313	-		Pf6N2E2_2735	0.37	-0.2
3,227,509	+		Pf6N2E2_2735	0.46	-0.0
3,227,509	+		Pf6N2E2_2735	0.46	-1.1
3,227,509	+		Pf6N2E2_2735	0.46	-0.8
3,227,509	+		Pf6N2E2_2735	0.46	+0.4
3,227,510	-		Pf6N2E2_2735	0.46	-0.5
3,227,519	+		Pf6N2E2_2735	0.47	+0.8
3,227,520	-		Pf6N2E2_2735	0.47	-0.9
3,227,520	-		Pf6N2E2_2735	0.47	-0.2
3,227,520	-		Pf6N2E2_2735	0.47	-0.6
3,227,520	-		Pf6N2E2_2735	0.47	-0.1
3,227,594	+		Pf6N2E2_2735	0.50	+0.7
3,227,595	-		Pf6N2E2_2735	0.50	-0.1
3,227,595	-		Pf6N2E2_2735	0.50	+1.4
3,227,768	+		Pf6N2E2_2735	0.59	+0.6
3,227,768	+		Pf6N2E2_2735	0.59	+0.0
3,227,768	+		Pf6N2E2_2735	0.59	+0.1
3,227,769	-		Pf6N2E2_2735	0.59	-0.5
3,227,769	-		Pf6N2E2_2735	0.59	-0.0
3,227,769	-		Pf6N2E2_2735	0.59	-0.3
3,227,783	+		Pf6N2E2_2735	0.59	-1.3
3,227,784	-		Pf6N2E2_2735	0.59	-1.1
3,227,819	+		Pf6N2E2_2735	0.61	-0.8
3,227,819	+		Pf6N2E2_2735	0.61	+1.4
3,227,820	-		Pf6N2E2_2735	0.61	-0.4
3,227,820	-		Pf6N2E2_2735	0.61	-0.5
3,227,820	-		Pf6N2E2_2735	0.61	+0.1
3,227,820	-		Pf6N2E2_2735	0.61	-0.3
3,227,851	+		Pf6N2E2_2735	0.63	-0.4
3,227,851	+		Pf6N2E2_2735	0.63	-0.4
3,227,852	-		Pf6N2E2_2735	0.63	+0.3
3,227,852	-		Pf6N2E2_2735	0.63	+0.7
3,228,050	+		Pf6N2E2_2735	0.72	+0.2
3,228,051	-		Pf6N2E2_2735	0.72	+0.3
3,228,079	+		Pf6N2E2_2735	0.74	-0.6
3,228,131	+		Pf6N2E2_2735	0.76	+0.5
3,228,132	-		Pf6N2E2_2735	0.76	+0.4
3,228,132	-		Pf6N2E2_2735	0.76	-1.3
3,228,132	-		Pf6N2E2_2735	0.76	+0.3
3,228,425	+				-0.4
3,228,426	-				+0.6
3,228,488	+				+1.0
3,228,488	+				-0.7
3,228,488	+				-0.0
3,228,488	+				-0.5
3,228,488	+				+1.0
3,228,489	-				+0.1
3,228,489	-				+0.1
3,228,489	-				+0.8
3,228,707	-		Pf6N2E2_2736	0.21	-0.0
3,228,825	+		Pf6N2E2_2736	0.52	-0.2
3,228,825	+		Pf6N2E2_2736	0.52	+1.1
3,228,826	-		Pf6N2E2_2736	0.52	-2.1
3,228,939	+		Pf6N2E2_2736	0.81	-0.4
3,228,940	-		Pf6N2E2_2736	0.82	+0.7
3,228,940	-		Pf6N2E2_2736	0.82	+1.3
3,229,049	-				+1.0
3,229,196	+		Pf6N2E2_2737	0.27	+0.8
3,229,197	-		Pf6N2E2_2737	0.27	+0.2
3,229,197	-		Pf6N2E2_2737	0.27	-1.1
3,229,210	-		Pf6N2E2_2737	0.29	+0.1
3,229,210	-		Pf6N2E2_2737	0.29	-1.6
3,229,212	+		Pf6N2E2_2737	0.29	+0.9
3,229,212	+		Pf6N2E2_2737	0.29	-0.2
3,229,213	-		Pf6N2E2_2737	0.29	-0.2
3,229,275	+		Pf6N2E2_2737	0.38	+1.1
3,229,276	-		Pf6N2E2_2737	0.38	-0.3
3,229,276	-		Pf6N2E2_2737	0.38	-0.0
3,229,276	-		Pf6N2E2_2737	0.38	-0.0
3,229,377	+		Pf6N2E2_2737	0.52	-0.1
3,229,377	+		Pf6N2E2_2737	0.52	-0.2
3,229,377	+		Pf6N2E2_2737	0.52	+0.7
3,229,377	+		Pf6N2E2_2737	0.52	-1.0
3,229,378	-		Pf6N2E2_2737	0.52	-2.1
3,229,609	+		Pf6N2E2_2737	0.85	-0.5