Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2493

Experiment: Rifampicin 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.003 mg/ml
2,939,578	+				+0.6
2,939,578	+				+0.3
2,939,578	+				-0.7
2,939,578	+				-2.4
2,939,579	-				-0.3
2,939,579	-				-1.2
2,939,579	-				+0.5
2,939,579	-				+0.1
2,939,708	+				+0.4
2,939,709	-				+0.2
2,939,753	-				-0.7
2,939,818	+				-0.9
2,939,818	+				+0.5
2,939,819	-				-0.0
2,939,819	-				-0.7
2,939,959	+		Pf6N2E2_2492	0.26	+1.1
2,940,324	+				-0.6
2,940,325	-				-1.7
2,940,325	-				+1.0
2,940,325	-				+0.7
2,940,327	+				+0.2
2,940,328	-				+1.1
2,940,356	+				-0.8
2,940,356	+				-1.3
2,940,356	+				-0.6
2,940,356	+				+0.1
2,940,357	-				+0.2
2,940,357	-				+0.8
2,940,357	-				+0.6
2,940,357	-				+0.0
2,940,385	+				+0.0
2,940,386	-				-1.0
2,940,406	+				-0.5
2,940,507	+				+0.0
2,940,533	-				-0.2
2,940,533	-				-3.5
2,940,536	+				+1.3
2,940,536	+				+0.8
2,940,536	+				+0.5
2,940,536	+				-0.6
2,940,537	-				-0.8
2,940,537	-				-0.4
2,940,537	-				-1.1
2,940,537	-				-1.8
2,940,582	-				+0.3
2,940,582	-				+0.8
2,940,631	+				+1.0
2,940,631	+				-0.9
2,940,631	+				-0.2
2,940,632	-				-0.2
2,940,632	-				-1.5
2,940,842	-		Pf6N2E2_2493	0.14	-0.5
2,941,424	-		Pf6N2E2_2493	0.42	+0.3
2,941,438	+		Pf6N2E2_2493	0.43	-2.0
2,941,527	+		Pf6N2E2_2493	0.47	-0.7
2,941,528	-		Pf6N2E2_2493	0.47	-0.3
2,941,528	-		Pf6N2E2_2493	0.47	-0.5
2,941,528	-		Pf6N2E2_2493	0.47	-1.5
2,941,532	-		Pf6N2E2_2493	0.48	-0.9
2,941,627	+		Pf6N2E2_2493	0.52	-0.1
2,941,627	+		Pf6N2E2_2493	0.52	-1.9
2,941,628	-		Pf6N2E2_2493	0.52	-0.3
2,941,628	-		Pf6N2E2_2493	0.52	-1.0
2,941,628	-		Pf6N2E2_2493	0.52	-2.1
2,941,637	+		Pf6N2E2_2493	0.53	+0.4
2,942,057	+		Pf6N2E2_2493	0.73	-1.4
2,942,600	+				+0.2
2,942,600	+				-1.8
2,942,600	+				-0.3
2,942,600	+				-0.2
2,942,601	-				+0.6
2,942,601	-				-1.0
2,942,601	-				-0.2
2,942,921	+		Pf6N2E2_2494	0.18	-0.5
2,942,921	+		Pf6N2E2_2494	0.18	+0.2
2,942,921	+		Pf6N2E2_2494	0.18	-0.1
2,942,921	+		Pf6N2E2_2494	0.18	-0.0
2,942,921	+		Pf6N2E2_2494	0.18	-0.0
2,942,921	+		Pf6N2E2_2494	0.18	+1.0
2,942,922	-		Pf6N2E2_2494	0.18	-0.2
2,942,922	-		Pf6N2E2_2494	0.18	-1.5
2,942,922	-		Pf6N2E2_2494	0.18	+0.6
2,942,927	+		Pf6N2E2_2494	0.18	+0.4
2,942,928	-		Pf6N2E2_2494	0.18	-1.5
2,942,928	-		Pf6N2E2_2494	0.18	-0.8
2,943,090	-		Pf6N2E2_2494	0.28	-0.3
2,943,139	+		Pf6N2E2_2494	0.31	+0.6
2,943,139	+		Pf6N2E2_2494	0.31	-0.1
2,943,482	+		Pf6N2E2_2494	0.51	-0.7
2,943,482	+		Pf6N2E2_2494	0.51	+1.1
2,943,483	-		Pf6N2E2_2494	0.51	-1.0
2,943,483	-		Pf6N2E2_2494	0.51	-1.9
2,943,483	-		Pf6N2E2_2494	0.51	+0.4
2,943,483	-		Pf6N2E2_2494	0.51	-0.3