Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1786

Experiment: Rifampicin 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.003 mg/ml
2,111,215	-		Pf6N2E2_1785	0.54	-1.2
2,111,230	-		Pf6N2E2_1785	0.56	-2.9
2,111,287	+		Pf6N2E2_1785	0.60	+0.9
2,111,287	+		Pf6N2E2_1785	0.60	+0.3
2,111,287	+		Pf6N2E2_1785	0.60	-1.5
2,111,287	+		Pf6N2E2_1785	0.60	-0.1
2,111,287	+		Pf6N2E2_1785	0.60	+0.9
2,111,287	+		Pf6N2E2_1785	0.60	-0.6
2,111,287	+		Pf6N2E2_1785	0.60	-2.1
2,111,287	+		Pf6N2E2_1785	0.60	-1.1
2,111,288	-		Pf6N2E2_1785	0.60	+0.8
2,111,288	-		Pf6N2E2_1785	0.60	-0.5
2,111,288	-		Pf6N2E2_1785	0.60	-0.1
2,111,288	-		Pf6N2E2_1785	0.60	+0.5
2,111,288	-		Pf6N2E2_1785	0.60	+0.2
2,111,288	-		Pf6N2E2_1785	0.60	-0.5
2,111,288	-		Pf6N2E2_1785	0.60	+1.1
2,111,288	-		Pf6N2E2_1785	0.60	+0.7
2,111,288	-		Pf6N2E2_1785	0.60	-2.3
2,111,288	-		Pf6N2E2_1785	0.60	-1.6
2,111,291	+		Pf6N2E2_1785	0.61	-0.2
2,111,291	+		Pf6N2E2_1785	0.61	-0.8
2,111,292	-		Pf6N2E2_1785	0.61	+0.6
2,111,292	-		Pf6N2E2_1785	0.61	-0.5
2,111,292	-		Pf6N2E2_1785	0.61	-1.0
2,111,292	-		Pf6N2E2_1785	0.61	+0.3
2,111,292	-		Pf6N2E2_1785	0.61	-1.6
2,111,292	-		Pf6N2E2_1785	0.61	+0.1
2,111,293	+		Pf6N2E2_1785	0.61	+1.1
2,111,293	+		Pf6N2E2_1785	0.61	-0.8
2,111,294	-		Pf6N2E2_1785	0.61	-0.9
2,111,294	-		Pf6N2E2_1785	0.61	-1.3
2,111,294	-		Pf6N2E2_1785	0.61	-0.2
2,111,347	-		Pf6N2E2_1785	0.65	-0.3
2,111,347	-		Pf6N2E2_1785	0.65	+1.6
2,111,347	-		Pf6N2E2_1785	0.65	+0.4
2,111,596	-		Pf6N2E2_1785	0.85	+0.3
2,111,596	-		Pf6N2E2_1785	0.85	+0.8
2,111,596	-		Pf6N2E2_1785	0.85	+0.2
2,111,709	+				+0.8
2,111,710	-				-0.4
2,111,737	+				-0.3
2,111,737	+				+0.8
2,111,737	+				+2.7
2,111,738	-				+0.9
2,111,738	-				-0.7
2,111,738	-				+0.9
2,111,769	-				-0.4
2,111,877	-				+0.5
2,111,879	+				+0.5
2,111,884	-				-1.2
2,111,917	-				+1.1
2,111,917	-				-0.1
2,111,917	-				+0.3
2,111,920	+				-0.5
2,111,934	-				+0.9
2,111,947	+				+0.4
2,111,948	-				-0.2
2,111,948	-				-0.4
2,111,959	+				+1.4
2,111,959	+				-0.1
2,111,962	+				-0.6
2,111,962	+				+1.0
2,111,963	-				+0.4
2,111,963	-				-0.2
2,111,976	+				+0.1
2,111,990	-				-0.4
2,112,026	-				-1.3
2,112,140	+				+0.7
2,112,140	+				+0.4
2,112,141	-				+0.7
2,112,151	+				-0.4
2,112,151	+				+0.7
2,112,152	-				+0.2
2,112,152	-				+0.6
2,112,152	-				+0.3
2,112,186	-				-0.7
2,112,190	+				-0.4
2,112,191	-				-1.1
2,112,274	+		Pf6N2E2_1786	0.11	+0.9
2,112,274	+		Pf6N2E2_1786	0.11	-0.6
2,112,275	-		Pf6N2E2_1786	0.11	+0.2
2,112,275	-		Pf6N2E2_1786	0.11	+0.8
2,112,319	-		Pf6N2E2_1786	0.14	+0.5
2,112,509	-		Pf6N2E2_1786	0.29	-0.4
2,112,551	-		Pf6N2E2_1786	0.33	+0.4
2,112,567	-		Pf6N2E2_1786	0.34	+1.9
2,112,745	+		Pf6N2E2_1786	0.48	-1.9
2,112,746	-		Pf6N2E2_1786	0.48	-0.3
2,112,765	+		Pf6N2E2_1786	0.49	-0.3
2,112,766	-		Pf6N2E2_1786	0.50	-2.3
2,112,769	-		Pf6N2E2_1786	0.50	+1.2
2,112,769	-		Pf6N2E2_1786	0.50	+2.9
2,112,769	-		Pf6N2E2_1786	0.50	+0.3
2,112,769	-		Pf6N2E2_1786	0.50	-0.4
2,112,769	-		Pf6N2E2_1786	0.50	+0.0
2,112,846	+		Pf6N2E2_1786	0.56	+0.2
2,112,847	-		Pf6N2E2_1786	0.56	-1.8
2,112,847	-		Pf6N2E2_1786	0.56	+7.5
2,112,850	-		Pf6N2E2_1786	0.56	-1.0
2,112,940	-		Pf6N2E2_1786	0.63	+1.4
2,113,013	-		Pf6N2E2_1786	0.69	+0.4
2,113,035	+		Pf6N2E2_1786	0.71	-0.8
2,113,080	+		Pf6N2E2_1786	0.74	+0.7
2,113,178	-		Pf6N2E2_1786	0.82	-1.7
2,113,178	-		Pf6N2E2_1786	0.82	-0.8
2,113,250	-		Pf6N2E2_1786	0.88	-0.7
2,113,308	-				-1.2
2,113,308	-				-1.7
2,113,342	-				+0.6
2,113,456	-				-0.2
2,113,572	+				+1.3
2,113,589	-				-0.0
2,113,594	+				-0.6
2,113,595	-				-0.6
2,113,599	-				+0.2
2,113,696	+				-0.4
2,113,696	+				+0.1
2,113,756	+				-1.4
2,113,757	-				+0.4
2,113,759	-				+0.1
2,113,759	-				-0.4
2,113,790	-				-0.3
2,113,848	-		Pf6N2E2_1787	0.14	-0.3
2,113,890	+		Pf6N2E2_1787	0.17	+1.3
2,113,891	-		Pf6N2E2_1787	0.17	+0.4
2,114,039	+		Pf6N2E2_1787	0.29	-0.3
2,114,152	+		Pf6N2E2_1787	0.38	+0.2
2,114,170	+		Pf6N2E2_1787	0.39	+0.7
2,114,219	-		Pf6N2E2_1787	0.43	-0.7
2,114,219	-		Pf6N2E2_1787	0.43	-0.2
2,114,289	+		Pf6N2E2_1787	0.49	-2.2
2,114,290	-		Pf6N2E2_1787	0.49	+0.6
2,114,302	+		Pf6N2E2_1787	0.50	-0.5
2,114,302	+		Pf6N2E2_1787	0.50	+0.5
2,114,303	-		Pf6N2E2_1787	0.50	-0.4
2,114,360	-		Pf6N2E2_1787	0.55	-0.7
2,114,360	-		Pf6N2E2_1787	0.55	+0.6