Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1728

Experiment: Rifampicin 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.003 mg/ml
2,037,180	+		Pf6N2E2_1727	0.59	-2.1
2,037,181	-		Pf6N2E2_1727	0.59	-1.1
2,037,240	-		Pf6N2E2_1727	0.62	-0.7
2,037,388	-		Pf6N2E2_1727	0.70	-0.5
2,037,404	+		Pf6N2E2_1727	0.71	-0.7
2,037,405	-		Pf6N2E2_1727	0.71	+0.2
2,037,444	+		Pf6N2E2_1727	0.73	+0.4
2,037,445	-		Pf6N2E2_1727	0.74	+0.0
2,037,445	-		Pf6N2E2_1727	0.74	+0.7
2,037,461	+		Pf6N2E2_1727	0.74	+0.5
2,037,462	-		Pf6N2E2_1727	0.75	-1.1
2,037,462	-		Pf6N2E2_1727	0.75	-0.3
2,037,462	-		Pf6N2E2_1727	0.75	+0.9
2,037,462	-		Pf6N2E2_1727	0.75	-0.7
2,037,714	-		Pf6N2E2_1727	0.89	+0.1
2,037,729	-		Pf6N2E2_1727	0.90	-0.8
2,037,781	+				+0.5
2,037,781	+				-0.1
2,037,781	+				-0.6
2,037,782	-				-0.2
2,037,782	-				-0.1
2,037,818	+				-2.0
2,038,141	+				+0.9
2,038,141	+				+0.5
2,038,411	-		Pf6N2E2_1728	0.12	+0.3
2,038,530	+		Pf6N2E2_1728	0.16	+0.4
2,038,530	+		Pf6N2E2_1728	0.16	-1.7
2,038,678	+		Pf6N2E2_1728	0.21	-1.0
2,038,836	+		Pf6N2E2_1728	0.26	+0.5
2,038,913	-				+1.7
2,038,927	+		Pf6N2E2_1728	0.29	+2.4
2,038,928	-		Pf6N2E2_1728	0.29	-0.2
2,038,930	-		Pf6N2E2_1728	0.30	-0.1
2,038,930	-		Pf6N2E2_1728	0.30	-2.4
2,038,968	+		Pf6N2E2_1728	0.31	-2.5
2,038,969	-		Pf6N2E2_1728	0.31	-1.6
2,039,062	+		Pf6N2E2_1728	0.34	+0.8
2,039,208	-		Pf6N2E2_1728	0.39	+1.2
2,039,294	-		Pf6N2E2_1728	0.42	-1.6
2,039,331	+		Pf6N2E2_1728	0.43	+0.5
2,039,331	+		Pf6N2E2_1728	0.43	-0.7
2,039,343	+		Pf6N2E2_1728	0.43	-0.4
2,039,344	-		Pf6N2E2_1728	0.43	+0.3
2,039,345	+		Pf6N2E2_1728	0.43	-0.2
2,039,345	+		Pf6N2E2_1728	0.43	-0.8
2,039,345	+		Pf6N2E2_1728	0.43	-0.1
2,039,345	+		Pf6N2E2_1728	0.43	+0.7
2,039,345	+		Pf6N2E2_1728	0.43	-0.4
2,039,345	+		Pf6N2E2_1728	0.43	+0.5
2,039,346	-		Pf6N2E2_1728	0.43	+0.7
2,039,346	-		Pf6N2E2_1728	0.43	+0.7
2,039,346	-		Pf6N2E2_1728	0.43	-1.2
2,039,346	-		Pf6N2E2_1728	0.43	-1.0
2,039,346	-		Pf6N2E2_1728	0.43	-1.1
2,039,346	-		Pf6N2E2_1728	0.43	+0.1
2,039,453	+		Pf6N2E2_1728	0.47	-0.6
2,039,453	+		Pf6N2E2_1728	0.47	-0.4
2,039,454	-		Pf6N2E2_1728	0.47	-0.6
2,039,532	+		Pf6N2E2_1728	0.50	+0.2
2,039,532	+		Pf6N2E2_1728	0.50	-0.6
2,039,532	+		Pf6N2E2_1728	0.50	+0.3
2,039,532	+		Pf6N2E2_1728	0.50	-0.6
2,039,533	-		Pf6N2E2_1728	0.50	+1.2
2,039,533	-		Pf6N2E2_1728	0.50	+0.2
2,039,605	-		Pf6N2E2_1728	0.52	-0.4
2,039,745	+		Pf6N2E2_1728	0.57	-1.8
2,039,746	-		Pf6N2E2_1728	0.57	+0.3
2,039,746	-		Pf6N2E2_1728	0.57	-0.1
2,040,288	+		Pf6N2E2_1728	0.75	+0.5
2,040,288	+		Pf6N2E2_1728	0.75	-1.4
2,040,288	+		Pf6N2E2_1728	0.75	-2.0
2,040,465	+		Pf6N2E2_1728	0.81	+0.7
2,040,772	-				-0.5
2,040,930	+				-0.1
2,041,017	-				-1.4
2,041,073	+				-0.4
2,041,279	+		Pf6N2E2_1729	0.22	-1.4
2,041,279	+		Pf6N2E2_1729	0.22	-0.3
2,041,279	+		Pf6N2E2_1729	0.22	-1.2
2,041,382	+		Pf6N2E2_1729	0.33	+0.2
2,041,383	-		Pf6N2E2_1729	0.33	+0.1
2,041,383	-		Pf6N2E2_1729	0.33	-0.7
2,041,506	+		Pf6N2E2_1729	0.45	+0.3
2,041,506	+		Pf6N2E2_1729	0.45	+1.2
2,041,507	-		Pf6N2E2_1729	0.45	+0.5
2,041,507	-		Pf6N2E2_1729	0.45	-0.9
2,041,507	-		Pf6N2E2_1729	0.45	-2.2
2,041,568	+		Pf6N2E2_1729	0.51	-0.3
2,041,568	+		Pf6N2E2_1729	0.51	+1.3
2,041,569	-		Pf6N2E2_1729	0.51	-0.1
2,041,591	+		Pf6N2E2_1729	0.53	-0.6
2,041,591	+		Pf6N2E2_1729	0.53	+0.0
2,041,592	-		Pf6N2E2_1729	0.53	-1.0
2,041,876	+		Pf6N2E2_1729	0.81	-1.1
2,041,877	-		Pf6N2E2_1729	0.81	-1.0