Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1182

Experiment: Rifampicin 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.003 mg/ml
1,383,267	+				-0.4
1,383,268	-				-2.4
1,383,268	-				+0.5
1,383,268	-				-1.5
1,383,268	-				+0.8
1,383,269	+				+0.1
1,383,269	+				-1.5
1,383,269	+				-0.3
1,383,270	-				+0.0
1,383,296	-				-0.5
1,383,542	+		Pf6N2E2_1181	0.27	+0.4
1,383,705	-		Pf6N2E2_1181	0.48	-1.1
1,383,808	-		Pf6N2E2_1181	0.62	-0.9
1,383,842	+		Pf6N2E2_1181	0.66	+0.3
1,383,842	+		Pf6N2E2_1181	0.66	+0.9
1,383,843	-		Pf6N2E2_1181	0.67	+1.1
1,383,843	-		Pf6N2E2_1181	0.67	-1.8
1,383,883	+		Pf6N2E2_1181	0.72	-0.1
1,383,883	+		Pf6N2E2_1181	0.72	+0.6
1,383,884	-		Pf6N2E2_1181	0.72	+0.6
1,383,951	+		Pf6N2E2_1181	0.81	-1.1
1,383,952	-		Pf6N2E2_1181	0.81	+0.1
1,384,029	+				-0.4
1,384,241	+		Pf6N2E2_1182	0.10	-2.0
1,384,354	+		Pf6N2E2_1182	0.23	+0.5
1,384,354	+		Pf6N2E2_1182	0.23	-0.4
1,384,355	-		Pf6N2E2_1182	0.23	-1.5
1,384,466	-		Pf6N2E2_1182	0.36	-0.1
1,385,116	-				+0.3
1,385,126	+				+1.7
1,385,127	-				-1.5
1,385,127	-				+0.6
1,385,387	+		Pf6N2E2_1183	0.17	+0.8
1,385,388	-		Pf6N2E2_1183	0.17	+0.4
1,385,519	+		Pf6N2E2_1183	0.28	+0.5
1,385,519	+		Pf6N2E2_1183	0.28	+1.6
1,385,519	+		Pf6N2E2_1183	0.28	-0.9
1,385,520	-				+1.0
1,385,556	+		Pf6N2E2_1183	0.31	+1.6
1,385,769	+		Pf6N2E2_1183	0.48	+0.4
1,385,905	+		Pf6N2E2_1183	0.59	+0.6
1,385,909	+		Pf6N2E2_1183	0.60	-2.9
1,385,909	+		Pf6N2E2_1183	0.60	-1.3
1,385,909	+		Pf6N2E2_1183	0.60	+0.2
1,385,910	-		Pf6N2E2_1183	0.60	-0.4
1,385,910	-		Pf6N2E2_1183	0.60	+0.3
1,385,910	-		Pf6N2E2_1183	0.60	+0.3
1,385,910	-		Pf6N2E2_1183	0.60	+0.6
1,385,910	-		Pf6N2E2_1183	0.60	-0.4
1,385,912	-		Pf6N2E2_1183	0.60	+0.6