Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1126

Experiment: Rifampicin 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.003 mg/ml
1,320,895	-				+1.2
1,320,922	+				+1.2
1,320,922	+				-0.6
1,320,922	+				+0.7
1,320,923	-				+1.5
1,321,081	+		Pf6N2E2_1125	0.18	-0.3
1,321,081	+		Pf6N2E2_1125	0.18	-1.4
1,321,082	-		Pf6N2E2_1125	0.18	+0.3
1,321,082	-		Pf6N2E2_1125	0.18	-0.6
1,321,132	+		Pf6N2E2_1125	0.24	+0.1
1,321,143	-		Pf6N2E2_1125	0.25	-0.1
1,321,241	+		Pf6N2E2_1125	0.36	+0.3
1,321,242	-		Pf6N2E2_1125	0.36	-0.8
1,321,300	-		Pf6N2E2_1125	0.42	+0.4
1,321,484	-		Pf6N2E2_1125	0.63	-1.0
1,321,537	+		Pf6N2E2_1125	0.69	+1.7
1,321,538	-		Pf6N2E2_1125	0.69	+0.9
1,321,927	+		Pf6N2E2_1126	0.16	+0.6
1,321,927	+		Pf6N2E2_1126	0.16	-0.8
1,321,929	+		Pf6N2E2_1126	0.17	+0.2
1,321,929	+		Pf6N2E2_1126	0.17	-1.5
1,321,929	+		Pf6N2E2_1126	0.17	-0.7
1,321,929	+		Pf6N2E2_1126	0.17	+0.1
1,321,930	-		Pf6N2E2_1126	0.17	-0.9
1,321,930	-		Pf6N2E2_1126	0.17	-2.8
1,321,930	-		Pf6N2E2_1126	0.17	+0.6
1,322,080	-		Pf6N2E2_1126	0.49	-0.4
1,322,330	-				+0.6
1,322,333	+				+0.3
1,322,333	+				+1.1
1,322,334	-				-0.2
1,322,365	-				-0.1
1,322,370	+				+0.3
1,322,370	+				+0.1
1,322,370	+				-0.3
1,322,370	+				-0.5
1,322,371	-				+1.6
1,322,371	-				+0.8
1,322,371	-				+0.6
1,322,371	-				+0.0
1,322,371	-				-0.6
1,322,749	+		Pf6N2E2_1127	0.19	+0.5
1,322,749	+		Pf6N2E2_1127	0.19	-0.2
1,322,749	+		Pf6N2E2_1127	0.19	+0.4
1,323,026	+		Pf6N2E2_1127	0.31	+0.9
1,323,026	+		Pf6N2E2_1127	0.31	+0.4
1,323,294	+		Pf6N2E2_1127	0.42	-2.1
1,323,295	-		Pf6N2E2_1127	0.42	+0.2