Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1008

Experiment: Rifampicin 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.003 mg/ml
1,175,813	-				-0.1
1,175,916	+				+0.7
1,175,964	+				-0.6
1,175,964	+				-0.5
1,175,964	+				-0.5
1,175,965	-				+0.1
1,175,965	-				+0.1
1,176,538	+		Pf6N2E2_1006	0.88	+1.8
1,176,538	+		Pf6N2E2_1006	0.88	-0.6
1,176,538	+		Pf6N2E2_1006	0.88	+1.8
1,176,538	+		Pf6N2E2_1006	0.88	-1.6
1,176,538	+		Pf6N2E2_1006	0.88	+1.1
1,176,539	-		Pf6N2E2_1006	0.88	-0.1
1,176,599	+				+0.9
1,176,599	+				+2.5
1,176,599	+				+0.0
1,176,599	+				-0.8
1,176,599	+				+0.3
1,176,606	+				-0.4
1,176,606	+				+0.1
1,176,829	+				+1.2
1,176,919	+				+0.6
1,176,919	+				+1.0
1,176,934	+				-1.1
1,176,944	+		Pf6N2E2_1008	0.10	+0.9
1,176,944	+		Pf6N2E2_1008	0.10	+0.0
1,176,945	-		Pf6N2E2_1008	0.10	+0.7
1,176,951	+		Pf6N2E2_1008	0.11	+0.2
1,176,968	+		Pf6N2E2_1008	0.12	-0.9
1,176,969	-		Pf6N2E2_1008	0.12	+0.6
1,176,995	+		Pf6N2E2_1008	0.14	-1.9
1,176,995	+		Pf6N2E2_1008	0.14	-0.7
1,176,995	+		Pf6N2E2_1008	0.14	-2.4
1,176,999	+		Pf6N2E2_1008	0.14	-1.1
1,177,000	-		Pf6N2E2_1008	0.14	+0.9
1,177,018	+		Pf6N2E2_1008	0.16	-0.5
1,177,018	+		Pf6N2E2_1008	0.16	+0.1
1,177,095	-		Pf6N2E2_1008	0.21	+0.1
1,177,199	+		Pf6N2E2_1008	0.28	+0.4
1,177,200	-		Pf6N2E2_1008	0.28	-1.0
1,177,200	-		Pf6N2E2_1008	0.28	-1.1
1,177,281	+		Pf6N2E2_1008	0.34	+0.4
1,177,281	+		Pf6N2E2_1008	0.34	-1.4
1,177,281	+		Pf6N2E2_1008	0.34	+0.3
1,177,281	+		Pf6N2E2_1008	0.34	-0.3
1,177,281	+		Pf6N2E2_1008	0.34	-1.1
1,177,281	+		Pf6N2E2_1008	0.34	+0.1
1,177,282	-		Pf6N2E2_1008	0.34	-0.6
1,177,282	-		Pf6N2E2_1008	0.34	-0.0
1,177,328	+		Pf6N2E2_1008	0.37	+1.1
1,177,350	+		Pf6N2E2_1008	0.38	-0.2
1,177,350	+		Pf6N2E2_1008	0.38	+0.6
1,177,350	+		Pf6N2E2_1008	0.38	-0.6
1,177,350	+		Pf6N2E2_1008	0.38	+0.2
1,177,351	-		Pf6N2E2_1008	0.38	-1.3
1,177,351	-		Pf6N2E2_1008	0.38	+0.0
1,177,351	-		Pf6N2E2_1008	0.38	-1.9
1,177,781	+		Pf6N2E2_1008	0.68	-0.4
1,177,958	+		Pf6N2E2_1008	0.80	+0.3
1,177,958	+		Pf6N2E2_1008	0.80	+2.0
1,177,959	-		Pf6N2E2_1008	0.80	-0.1
1,178,014	+		Pf6N2E2_1008	0.84	-0.9
1,178,096	-		Pf6N2E2_1008	0.89	+0.4
1,178,362	+				-0.2
1,178,362	+				-0.2
1,178,363	-				+0.2
1,178,391	+				+1.3
1,178,410	+				+1.6
1,178,411	-				+0.4
1,178,470	+				-1.4
1,178,480	+				+1.5
1,178,480	+				-0.5
1,178,480	+				+0.8
1,178,480	+				-0.5
1,178,480	+				+0.5
1,178,480	+				+1.9
1,178,480	+				+0.6
1,178,480	+				-1.3
1,178,480	+				-0.9
1,178,480	+				+0.7
1,178,480	+				+0.6
1,178,481	-				+0.4
1,178,497	+				-0.3
1,178,497	+				-1.0
1,178,497	+				+0.1
1,178,497	+				-0.8
1,178,497	+				-0.5
1,178,498	-				+0.4
1,178,498	-				+0.5
1,178,498	-				+0.8
1,178,498	-				+1.4
1,178,657	+				-0.2
1,178,860	+				+1.1
1,178,868	+				-1.1
1,178,868	+				+0.5
1,178,872	+				-0.2
1,178,872	+				-0.8
1,178,872	+				+1.3
1,178,872	+				-0.0
1,178,872	+				+1.2
1,178,873	-				+1.1
1,178,905	+				-0.6
1,178,905	+				+0.7
1,178,905	+				+0.8
1,178,905	+				+0.0
1,178,905	+				+0.1
1,178,905	+				-1.4
1,178,906	-				-0.1
1,178,906	-				-0.7
1,178,907	+				+0.6
1,178,979	+				+0.0
1,178,979	+				+0.3
1,178,979	+				-0.1
1,178,979	+				-0.5
1,178,979	+				+0.3
1,178,979	+				+0.3
1,178,984	-				+1.1
1,179,210	+		Pf6N2E2_1009	0.60	-0.0
1,179,210	+		Pf6N2E2_1009	0.60	+0.2
1,179,211	-		Pf6N2E2_1009	0.60	-0.1