Experiment: LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03744 and H281DRAFT_03745 are separated by 100 nucleotides H281DRAFT_03745 and H281DRAFT_03746 overlap by 4 nucleotides H281DRAFT_03746 and H281DRAFT_03747 are separated by 204 nucleotides
H281DRAFT_03744: H281DRAFT_03744 - Uncharacterized conserved protein, DUF1330 family, at 260,420 to 260,713
_03744
H281DRAFT_03745: H281DRAFT_03745 - carbohydrate ABC transporter membrane protein 2, CUT1 family, at 260,814 to 261,665
_03745
H281DRAFT_03746: H281DRAFT_03746 - carbohydrate ABC transporter membrane protein 1, CUT1 family, at 261,662 to 262,552
_03746
H281DRAFT_03747: H281DRAFT_03747 - carbohydrate ABC transporter substrate-binding protein, CUT1 family, at 262,757 to 263,989
_03747
Position (kb) 261
262
263 Strain fitness (log2 ratio) -1
0
1 at 260.734 kb on + strand at 260.815 kb on + strand at 260.815 kb on + strand at 260.815 kb on + strand at 261.036 kb on - strand, within H281DRAFT_03745 at 261.343 kb on + strand, within H281DRAFT_03745 at 261.702 kb on + strand at 261.799 kb on - strand, within H281DRAFT_03746 at 261.811 kb on + strand, within H281DRAFT_03746 at 261.812 kb on - strand, within H281DRAFT_03746 at 261.812 kb on - strand, within H281DRAFT_03746 at 261.877 kb on - strand, within H281DRAFT_03746 at 261.984 kb on + strand, within H281DRAFT_03746 at 262.332 kb on - strand, within H281DRAFT_03746 at 263.035 kb on - strand, within H281DRAFT_03747 at 263.148 kb on + strand, within H281DRAFT_03747 at 263.391 kb on - strand, within H281DRAFT_03747 at 263.391 kb on - strand, within H281DRAFT_03747 at 263.395 kb on - strand, within H281DRAFT_03747 at 263.395 kb on - strand, within H281DRAFT_03747 at 263.484 kb on - strand, within H281DRAFT_03747 at 263.544 kb on + strand, within H281DRAFT_03747
Per-strain Table
Position Strand Gene LocusTag Fraction LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x remove 260,734 + -0.3 260,815 + +0.2 260,815 + -0.2 260,815 + +0.3 261,036 - H281DRAFT_03745 0.26 +0.5 261,343 + H281DRAFT_03745 0.62 -0.8 261,702 + +0.2 261,799 - H281DRAFT_03746 0.15 +0.1 261,811 + H281DRAFT_03746 0.17 +1.0 261,812 - H281DRAFT_03746 0.17 +0.8 261,812 - H281DRAFT_03746 0.17 -0.6 261,877 - H281DRAFT_03746 0.24 -1.0 261,984 + H281DRAFT_03746 0.36 -0.4 262,332 - H281DRAFT_03746 0.75 +0.6 263,035 - H281DRAFT_03747 0.23 +0.8 263,148 + H281DRAFT_03747 0.32 +0.4 263,391 - H281DRAFT_03747 0.51 +0.1 263,391 - H281DRAFT_03747 0.51 +0.8 263,395 - H281DRAFT_03747 0.52 +0.5 263,395 - H281DRAFT_03747 0.52 +0.5 263,484 - H281DRAFT_03747 0.59 +0.3 263,544 + H281DRAFT_03747 0.64 +0.1
Or see this region's nucleotide sequence