Experiment: LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02892 and H281DRAFT_02893 are separated by 416 nucleotides H281DRAFT_02893 and H281DRAFT_02894 are separated by 18 nucleotides H281DRAFT_02894 and H281DRAFT_02895 are separated by 42 nucleotides
H281DRAFT_02892: H281DRAFT_02892 - carboxyvinyl-carboxyphosphonate phosphorylmutase, at 494,779 to 495,660
_02892
H281DRAFT_02893: H281DRAFT_02893 - drug resistance transporter, EmrB/QacA subfamily, at 496,077 to 497,516
_02893
H281DRAFT_02894: H281DRAFT_02894 - Acetyltransferases, at 497,535 to 497,981
_02894
H281DRAFT_02895: H281DRAFT_02895 - prolyl 4-hydroxylase, at 498,024 to 498,920
_02895
Position (kb) 496
497
498 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 495.622 kb on + strand at 495.622 kb on + strand at 495.623 kb on - strand at 495.730 kb on + strand at 495.730 kb on + strand at 495.730 kb on + strand at 495.731 kb on - strand at 495.731 kb on - strand at 495.731 kb on - strand at 495.806 kb on + strand at 495.806 kb on + strand at 495.806 kb on + strand at 495.806 kb on + strand at 495.807 kb on - strand at 495.848 kb on - strand at 495.849 kb on + strand at 495.850 kb on - strand at 495.850 kb on - strand at 495.850 kb on - strand at 495.850 kb on - strand at 495.961 kb on - strand at 495.992 kb on + strand at 496.046 kb on + strand at 496.047 kb on - strand at 496.123 kb on - strand at 496.123 kb on - strand at 496.125 kb on - strand at 496.245 kb on + strand, within H281DRAFT_02893 at 496.246 kb on - strand, within H281DRAFT_02893 at 496.502 kb on - strand, within H281DRAFT_02893 at 496.563 kb on + strand, within H281DRAFT_02893 at 496.563 kb on + strand, within H281DRAFT_02893 at 496.563 kb on + strand, within H281DRAFT_02893 at 496.564 kb on - strand, within H281DRAFT_02893 at 496.564 kb on - strand, within H281DRAFT_02893 at 496.564 kb on - strand, within H281DRAFT_02893 at 496.932 kb on + strand, within H281DRAFT_02893 at 496.932 kb on + strand, within H281DRAFT_02893 at 496.933 kb on - strand at 496.933 kb on - strand, within H281DRAFT_02893 at 496.933 kb on - strand, within H281DRAFT_02893 at 497.440 kb on - strand at 497.440 kb on - strand at 497.950 kb on + strand at 497.950 kb on + strand at 498.269 kb on + strand, within H281DRAFT_02895 at 498.305 kb on - strand, within H281DRAFT_02895 at 498.340 kb on + strand, within H281DRAFT_02895 at 498.340 kb on + strand, within H281DRAFT_02895
Per-strain Table
Position Strand Gene LocusTag Fraction LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x remove 495,622 + +0.6 495,622 + -0.4 495,623 - -0.1 495,730 + +0.4 495,730 + +0.5 495,730 + +1.6 495,731 - +0.5 495,731 - +0.3 495,731 - -0.2 495,806 + -1.6 495,806 + -0.5 495,806 + -0.1 495,806 + -2.0 495,807 - -0.5 495,848 - +0.6 495,849 + +1.3 495,850 - -0.7 495,850 - -1.1 495,850 - -0.6 495,850 - -0.5 495,961 - +0.2 495,992 + -0.5 496,046 + -2.5 496,047 - -0.1 496,123 - +0.2 496,123 - +1.7 496,125 - -0.4 496,245 + H281DRAFT_02893 0.12 +0.2 496,246 - H281DRAFT_02893 0.12 +0.2 496,502 - H281DRAFT_02893 0.30 +0.4 496,563 + H281DRAFT_02893 0.34 -0.7 496,563 + H281DRAFT_02893 0.34 -0.8 496,563 + H281DRAFT_02893 0.34 -0.6 496,564 - H281DRAFT_02893 0.34 -0.3 496,564 - H281DRAFT_02893 0.34 -0.1 496,564 - H281DRAFT_02893 0.34 +0.1 496,932 + H281DRAFT_02893 0.59 +0.7 496,932 + H281DRAFT_02893 0.59 -1.1 496,933 - -1.3 496,933 - H281DRAFT_02893 0.59 -0.3 496,933 - H281DRAFT_02893 0.59 +0.1 497,440 - +0.1 497,440 - +0.7 497,950 + -0.1 497,950 + +3.0 498,269 + H281DRAFT_02895 0.27 -1.4 498,305 - H281DRAFT_02895 0.31 +1.3 498,340 + H281DRAFT_02895 0.35 -0.1 498,340 + H281DRAFT_02895 0.35 -0.2
Or see this region's nucleotide sequence