Experiment: LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00527 and H281DRAFT_00528 are separated by 3 nucleotides H281DRAFT_00528 and H281DRAFT_00529 are separated by 295 nucleotides H281DRAFT_00529 and H281DRAFT_00530 are separated by 154 nucleotides
H281DRAFT_00527: H281DRAFT_00527 - Adenylosuccinate synthetase, at 589,283 to 590,629
_00527
H281DRAFT_00528: H281DRAFT_00528 - hypothetical protein, at 590,633 to 591,223
_00528
H281DRAFT_00529: H281DRAFT_00529 - KUP system potassium uptake protein, at 591,519 to 593,405
_00529
H281DRAFT_00530: H281DRAFT_00530 - uncharacterized protein, at 593,560 to 595,908
_00530
Position (kb) 591
592
593
594 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 590.628 kb on - strand at 590.712 kb on - strand, within H281DRAFT_00528 at 590.828 kb on + strand, within H281DRAFT_00528 at 590.829 kb on - strand, within H281DRAFT_00528 at 590.912 kb on + strand, within H281DRAFT_00528 at 590.912 kb on + strand, within H281DRAFT_00528 at 591.102 kb on - strand, within H281DRAFT_00528 at 591.241 kb on + strand at 591.335 kb on + strand at 591.336 kb on - strand at 591.336 kb on - strand at 591.368 kb on + strand at 591.396 kb on - strand at 591.396 kb on - strand at 591.406 kb on + strand at 591.407 kb on - strand at 591.527 kb on + strand at 591.528 kb on - strand at 591.528 kb on - strand at 591.553 kb on + strand at 592.094 kb on + strand, within H281DRAFT_00529 at 592.138 kb on - strand, within H281DRAFT_00529 at 592.165 kb on + strand at 592.177 kb on - strand, within H281DRAFT_00529 at 592.308 kb on + strand, within H281DRAFT_00529 at 592.491 kb on + strand, within H281DRAFT_00529 at 592.545 kb on + strand, within H281DRAFT_00529 at 592.546 kb on - strand, within H281DRAFT_00529 at 592.760 kb on - strand, within H281DRAFT_00529 at 592.969 kb on - strand at 593.083 kb on - strand, within H281DRAFT_00529 at 593.205 kb on - strand, within H281DRAFT_00529 at 593.505 kb on - strand at 593.529 kb on + strand at 593.751 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x remove 590,628 - -0.5 590,712 - H281DRAFT_00528 0.13 -0.5 590,828 + H281DRAFT_00528 0.33 -1.0 590,829 - H281DRAFT_00528 0.33 +1.5 590,912 + H281DRAFT_00528 0.47 -0.6 590,912 + H281DRAFT_00528 0.47 +0.1 591,102 - H281DRAFT_00528 0.79 -0.2 591,241 + +0.2 591,335 + +0.7 591,336 - -0.0 591,336 - -3.1 591,368 + +0.8 591,396 - -1.5 591,396 - +0.1 591,406 + +0.4 591,407 - +0.5 591,527 + +0.5 591,528 - +1.7 591,528 - +0.5 591,553 + +1.9 592,094 + H281DRAFT_00529 0.30 -2.1 592,138 - H281DRAFT_00529 0.33 -0.7 592,165 + +1.7 592,177 - H281DRAFT_00529 0.35 -0.3 592,308 + H281DRAFT_00529 0.42 -1.6 592,491 + H281DRAFT_00529 0.52 -1.7 592,545 + H281DRAFT_00529 0.54 -2.1 592,546 - H281DRAFT_00529 0.54 +1.3 592,760 - H281DRAFT_00529 0.66 -0.6 592,969 - -0.3 593,083 - H281DRAFT_00529 0.83 -3.4 593,205 - H281DRAFT_00529 0.89 +0.4 593,505 - +0.8 593,529 + +1.0 593,751 + -0.6
Or see this region's nucleotide sequence