Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_2746 and Ga0059261_2747 are separated by 0 nucleotides Ga0059261_2747 and Ga0059261_2748 are separated by 11 nucleotides Ga0059261_2748 and Ga0059261_2749 are separated by 93 nucleotides Ga0059261_2749 and Ga0059261_2750 are separated by 76 nucleotides
Ga0059261_2746: Ga0059261_2746 - Predicted sugar nucleotidyltransferases, at 2,856,113 to 2,856,814
_2746
Ga0059261_2747: Ga0059261_2747 - Cupin domain, at 2,856,815 to 2,857,210
_2747
Ga0059261_2748: Ga0059261_2748 - Uncharacterized protein conserved in bacteria, at 2,857,222 to 2,857,722
_2748
Ga0059261_2749: Ga0059261_2749 - transcriptional regulator, TetR family, at 2,857,816 to 2,858,457
_2749
Ga0059261_2750: Ga0059261_2750 - TonB-dependent siderophore receptor, at 2,858,534 to 2,860,681
_2750
Position (kb)
2857
2858 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2856.302 kb on + strand, within Ga0059261_2746 at 2856.302 kb on + strand at 2856.303 kb on - strand, within Ga0059261_2746 at 2856.303 kb on - strand, within Ga0059261_2746 at 2856.303 kb on - strand, within Ga0059261_2746 at 2856.357 kb on - strand, within Ga0059261_2746 at 2856.357 kb on - strand, within Ga0059261_2746 at 2856.461 kb on + strand, within Ga0059261_2746 at 2856.461 kb on + strand, within Ga0059261_2746 at 2856.462 kb on - strand, within Ga0059261_2746 at 2856.620 kb on + strand, within Ga0059261_2746 at 2856.620 kb on + strand, within Ga0059261_2746 at 2856.812 kb on + strand at 2856.812 kb on + strand at 2856.812 kb on + strand at 2856.812 kb on + strand at 2856.812 kb on + strand at 2856.813 kb on - strand at 2856.813 kb on - strand at 2856.813 kb on - strand at 2856.813 kb on - strand at 2856.813 kb on - strand at 2856.813 kb on - strand at 2856.816 kb on + strand at 2856.816 kb on + strand at 2856.816 kb on + strand at 2856.817 kb on - strand at 2856.817 kb on - strand at 2856.817 kb on - strand at 2856.817 kb on - strand at 2856.817 kb on - strand at 2856.817 kb on - strand at 2856.924 kb on + strand, within Ga0059261_2747 at 2856.925 kb on - strand, within Ga0059261_2747 at 2856.925 kb on - strand, within Ga0059261_2747 at 2856.925 kb on - strand, within Ga0059261_2747 at 2857.116 kb on + strand, within Ga0059261_2747 at 2857.116 kb on + strand, within Ga0059261_2747 at 2857.116 kb on + strand, within Ga0059261_2747 at 2857.116 kb on + strand, within Ga0059261_2747 at 2857.116 kb on + strand, within Ga0059261_2747 at 2857.117 kb on - strand, within Ga0059261_2747 at 2857.117 kb on - strand, within Ga0059261_2747 at 2857.117 kb on - strand, within Ga0059261_2747 at 2857.117 kb on - strand, within Ga0059261_2747 at 2857.125 kb on + strand, within Ga0059261_2747 at 2857.125 kb on + strand, within Ga0059261_2747 at 2857.125 kb on + strand, within Ga0059261_2747 at 2857.125 kb on + strand, within Ga0059261_2747 at 2857.125 kb on + strand, within Ga0059261_2747 at 2857.126 kb on - strand, within Ga0059261_2747 at 2857.126 kb on - strand, within Ga0059261_2747 at 2857.126 kb on - strand, within Ga0059261_2747 at 2857.126 kb on - strand, within Ga0059261_2747 at 2857.315 kb on - strand, within Ga0059261_2748 at 2857.328 kb on + strand, within Ga0059261_2748 at 2857.328 kb on + strand, within Ga0059261_2748 at 2857.328 kb on + strand, within Ga0059261_2748 at 2857.328 kb on + strand, within Ga0059261_2748 at 2857.328 kb on + strand, within Ga0059261_2748 at 2857.328 kb on + strand, within Ga0059261_2748 at 2857.329 kb on - strand, within Ga0059261_2748 at 2857.329 kb on - strand, within Ga0059261_2748 at 2857.329 kb on - strand, within Ga0059261_2748 at 2857.329 kb on - strand, within Ga0059261_2748 at 2857.329 kb on - strand, within Ga0059261_2748 at 2857.329 kb on - strand, within Ga0059261_2748 at 2857.329 kb on - strand, within Ga0059261_2748 at 2857.329 kb on - strand, within Ga0059261_2748 at 2857.329 kb on - strand, within Ga0059261_2748 at 2857.448 kb on + strand, within Ga0059261_2748 at 2857.449 kb on - strand, within Ga0059261_2748 at 2857.449 kb on - strand, within Ga0059261_2748 at 2857.457 kb on + strand, within Ga0059261_2748 at 2857.457 kb on + strand, within Ga0059261_2748 at 2857.457 kb on + strand, within Ga0059261_2748 at 2857.457 kb on + strand, within Ga0059261_2748 at 2857.457 kb on + strand, within Ga0059261_2748 at 2857.458 kb on - strand, within Ga0059261_2748 at 2857.458 kb on - strand, within Ga0059261_2748 at 2857.458 kb on - strand, within Ga0059261_2748 at 2857.458 kb on - strand, within Ga0059261_2748 at 2857.458 kb on - strand, within Ga0059261_2748 at 2857.458 kb on - strand, within Ga0059261_2748 at 2857.458 kb on - strand, within Ga0059261_2748 at 2857.458 kb on - strand, within Ga0059261_2748 at 2857.458 kb on - strand, within Ga0059261_2748 at 2857.458 kb on - strand, within Ga0059261_2748 at 2857.458 kb on - strand, within Ga0059261_2748 at 2857.458 kb on - strand, within Ga0059261_2748 at 2857.587 kb on + strand, within Ga0059261_2748 at 2857.588 kb on - strand, within Ga0059261_2748 at 2857.689 kb on - strand at 2857.689 kb on - strand at 2857.706 kb on + strand at 2857.707 kb on - strand at 2857.707 kb on - strand at 2857.759 kb on + strand at 2857.774 kb on - strand at 2857.789 kb on + strand at 2857.908 kb on + strand, within Ga0059261_2749 at 2857.908 kb on + strand, within Ga0059261_2749 at 2857.908 kb on + strand, within Ga0059261_2749 at 2857.909 kb on - strand, within Ga0059261_2749 at 2857.909 kb on - strand, within Ga0059261_2749 at 2857.909 kb on - strand, within Ga0059261_2749 at 2857.909 kb on - strand, within Ga0059261_2749 at 2857.927 kb on + strand, within Ga0059261_2749 at 2857.927 kb on + strand, within Ga0059261_2749 at 2857.927 kb on + strand, within Ga0059261_2749 at 2857.928 kb on - strand, within Ga0059261_2749 at 2857.928 kb on - strand, within Ga0059261_2749 at 2857.928 kb on - strand, within Ga0059261_2749 at 2857.928 kb on - strand, within Ga0059261_2749 at 2857.987 kb on + strand, within Ga0059261_2749 at 2857.987 kb on + strand, within Ga0059261_2749 at 2857.987 kb on + strand, within Ga0059261_2749 at 2857.987 kb on + strand, within Ga0059261_2749 at 2857.988 kb on - strand, within Ga0059261_2749 at 2857.988 kb on - strand, within Ga0059261_2749 at 2857.988 kb on - strand, within Ga0059261_2749 at 2857.988 kb on - strand, within Ga0059261_2749 at 2857.993 kb on + strand, within Ga0059261_2749 at 2857.993 kb on + strand, within Ga0059261_2749 at 2857.993 kb on + strand, within Ga0059261_2749 at 2857.993 kb on + strand, within Ga0059261_2749 at 2857.993 kb on + strand, within Ga0059261_2749 at 2857.993 kb on + strand, within Ga0059261_2749 at 2857.994 kb on - strand, within Ga0059261_2749 at 2857.994 kb on - strand, within Ga0059261_2749 at 2857.994 kb on - strand, within Ga0059261_2749 at 2857.994 kb on - strand, within Ga0059261_2749 at 2857.994 kb on - strand, within Ga0059261_2749 at 2858.254 kb on + strand, within Ga0059261_2749 at 2858.255 kb on - strand, within Ga0059261_2749 at 2858.255 kb on - strand, within Ga0059261_2749 at 2858.419 kb on + strand at 2858.419 kb on + strand at 2858.419 kb on + strand at 2858.420 kb on - strand at 2858.420 kb on - strand at 2858.420 kb on - strand at 2858.420 kb on - strand at 2858.467 kb on + strand at 2858.501 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 2,856,302 + Ga0059261_2746 0.27 -0.4 2,856,302 + +2.1 2,856,303 - Ga0059261_2746 0.27 +0.8 2,856,303 - Ga0059261_2746 0.27 +1.3 2,856,303 - Ga0059261_2746 0.27 +0.5 2,856,357 - Ga0059261_2746 0.35 +0.6 2,856,357 - Ga0059261_2746 0.35 +0.9 2,856,461 + Ga0059261_2746 0.50 +1.3 2,856,461 + Ga0059261_2746 0.50 +0.9 2,856,462 - Ga0059261_2746 0.50 +1.0 2,856,620 + Ga0059261_2746 0.72 +2.1 2,856,620 + Ga0059261_2746 0.72 +2.4 2,856,812 + +0.9 2,856,812 + -0.0 2,856,812 + -0.3 2,856,812 + +0.1 2,856,812 + +0.6 2,856,813 - +0.4 2,856,813 - -0.4 2,856,813 - -0.3 2,856,813 - +0.0 2,856,813 - -0.4 2,856,813 - +0.1 2,856,816 + +0.2 2,856,816 + +0.1 2,856,816 + -0.4 2,856,817 - -0.4 2,856,817 - -0.6 2,856,817 - -0.7 2,856,817 - +0.3 2,856,817 - +0.1 2,856,817 - +0.6 2,856,924 + Ga0059261_2747 0.28 +0.1 2,856,925 - Ga0059261_2747 0.28 +0.3 2,856,925 - Ga0059261_2747 0.28 -0.3 2,856,925 - Ga0059261_2747 0.28 +0.7 2,857,116 + Ga0059261_2747 0.76 +0.0 2,857,116 + Ga0059261_2747 0.76 +0.2 2,857,116 + Ga0059261_2747 0.76 +0.1 2,857,116 + Ga0059261_2747 0.76 -0.6 2,857,116 + Ga0059261_2747 0.76 -1.1 2,857,117 - Ga0059261_2747 0.76 -0.7 2,857,117 - Ga0059261_2747 0.76 -0.2 2,857,117 - Ga0059261_2747 0.76 -0.6 2,857,117 - Ga0059261_2747 0.76 +0.8 2,857,125 + Ga0059261_2747 0.78 -0.3 2,857,125 + Ga0059261_2747 0.78 +0.1 2,857,125 + Ga0059261_2747 0.78 -0.2 2,857,125 + Ga0059261_2747 0.78 +0.6 2,857,125 + Ga0059261_2747 0.78 +0.3 2,857,126 - Ga0059261_2747 0.79 -1.0 2,857,126 - Ga0059261_2747 0.79 -0.1 2,857,126 - Ga0059261_2747 0.79 -0.2 2,857,126 - Ga0059261_2747 0.79 +0.1 2,857,315 - Ga0059261_2748 0.19 -0.4 2,857,328 + Ga0059261_2748 0.21 -0.1 2,857,328 + Ga0059261_2748 0.21 +0.1 2,857,328 + Ga0059261_2748 0.21 -2.3 2,857,328 + Ga0059261_2748 0.21 -0.1 2,857,328 + Ga0059261_2748 0.21 -0.1 2,857,328 + Ga0059261_2748 0.21 +1.1 2,857,329 - Ga0059261_2748 0.21 +0.2 2,857,329 - Ga0059261_2748 0.21 -0.2 2,857,329 - Ga0059261_2748 0.21 -0.4 2,857,329 - Ga0059261_2748 0.21 +0.6 2,857,329 - Ga0059261_2748 0.21 -0.2 2,857,329 - Ga0059261_2748 0.21 +0.1 2,857,329 - Ga0059261_2748 0.21 +0.1 2,857,329 - Ga0059261_2748 0.21 +0.3 2,857,329 - Ga0059261_2748 0.21 +0.2 2,857,448 + Ga0059261_2748 0.45 +1.9 2,857,449 - Ga0059261_2748 0.45 +0.1 2,857,449 - Ga0059261_2748 0.45 -0.1 2,857,457 + Ga0059261_2748 0.47 -0.7 2,857,457 + Ga0059261_2748 0.47 +0.9 2,857,457 + Ga0059261_2748 0.47 +0.8 2,857,457 + Ga0059261_2748 0.47 +0.7 2,857,457 + Ga0059261_2748 0.47 -1.0 2,857,458 - Ga0059261_2748 0.47 -0.1 2,857,458 - Ga0059261_2748 0.47 +0.0 2,857,458 - Ga0059261_2748 0.47 -0.5 2,857,458 - Ga0059261_2748 0.47 -0.9 2,857,458 - Ga0059261_2748 0.47 +0.6 2,857,458 - Ga0059261_2748 0.47 +0.0 2,857,458 - Ga0059261_2748 0.47 +0.5 2,857,458 - Ga0059261_2748 0.47 -0.1 2,857,458 - Ga0059261_2748 0.47 -0.4 2,857,458 - Ga0059261_2748 0.47 -0.6 2,857,458 - Ga0059261_2748 0.47 -0.7 2,857,458 - Ga0059261_2748 0.47 +0.4 2,857,587 + Ga0059261_2748 0.73 -0.1 2,857,588 - Ga0059261_2748 0.73 -0.2 2,857,689 - -0.3 2,857,689 - -0.6 2,857,706 + +0.5 2,857,707 - +1.1 2,857,707 - +0.2 2,857,759 + -0.1 2,857,774 - -0.4 2,857,789 + -0.1 2,857,908 + Ga0059261_2749 0.14 -2.5 2,857,908 + Ga0059261_2749 0.14 -0.6 2,857,908 + Ga0059261_2749 0.14 -1.0 2,857,909 - Ga0059261_2749 0.14 +0.2 2,857,909 - Ga0059261_2749 0.14 -0.5 2,857,909 - Ga0059261_2749 0.14 -0.4 2,857,909 - Ga0059261_2749 0.14 +0.5 2,857,927 + Ga0059261_2749 0.17 -0.4 2,857,927 + Ga0059261_2749 0.17 +0.0 2,857,927 + Ga0059261_2749 0.17 +1.0 2,857,928 - Ga0059261_2749 0.17 +1.6 2,857,928 - Ga0059261_2749 0.17 +0.3 2,857,928 - Ga0059261_2749 0.17 -1.5 2,857,928 - Ga0059261_2749 0.17 -0.0 2,857,987 + Ga0059261_2749 0.27 -0.2 2,857,987 + Ga0059261_2749 0.27 -0.2 2,857,987 + Ga0059261_2749 0.27 -0.1 2,857,987 + Ga0059261_2749 0.27 +0.4 2,857,988 - Ga0059261_2749 0.27 -0.8 2,857,988 - Ga0059261_2749 0.27 +0.0 2,857,988 - Ga0059261_2749 0.27 -0.7 2,857,988 - Ga0059261_2749 0.27 +0.6 2,857,993 + Ga0059261_2749 0.28 +0.5 2,857,993 + Ga0059261_2749 0.28 +0.2 2,857,993 + Ga0059261_2749 0.28 -0.1 2,857,993 + Ga0059261_2749 0.28 -1.4 2,857,993 + Ga0059261_2749 0.28 +0.7 2,857,993 + Ga0059261_2749 0.28 -0.5 2,857,994 - Ga0059261_2749 0.28 -0.7 2,857,994 - Ga0059261_2749 0.28 -0.1 2,857,994 - Ga0059261_2749 0.28 +0.3 2,857,994 - Ga0059261_2749 0.28 -0.1 2,857,994 - Ga0059261_2749 0.28 +0.3 2,858,254 + Ga0059261_2749 0.68 -0.4 2,858,255 - Ga0059261_2749 0.68 -0.2 2,858,255 - Ga0059261_2749 0.68 +0.3 2,858,419 + +0.3 2,858,419 + +0.0 2,858,419 + -0.4 2,858,420 - +0.2 2,858,420 - -0.5 2,858,420 - +0.2 2,858,420 - +0.1 2,858,467 + -2.9 2,858,501 + -0.8
Or see this region's nucleotide sequence