Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_2514 and Ga0059261_2515 are separated by 76 nucleotides Ga0059261_2515 and Ga0059261_2516 are separated by 68 nucleotides Ga0059261_2516 and Ga0059261_2517 are separated by 76 nucleotides Ga0059261_2517 and Ga0059261_2518 are separated by 4 nucleotides
Ga0059261_2514: Ga0059261_2514 - phosphoenolpyruvate-protein phosphotransferase, at 2,604,815 to 2,607,094
_2514
Ga0059261_2515: Ga0059261_2515 - hypothetical protein, at 2,607,171 to 2,607,896
_2515
Ga0059261_2516: Ga0059261_2516 - Dioxygenases related to 2-nitropropane dioxygenase, at 2,607,965 to 2,608,983
_2516
Ga0059261_2517: Ga0059261_2517 - Predicted metal-dependent hydrolase of the TIM-barrel fold, at 2,609,060 to 2,609,908
_2517
Ga0059261_2518: Ga0059261_2518 - Metal-dependent hydrolase, at 2,609,913 to 2,610,725
_2518
Position (kb)
2607
2608
2609 Strain fitness (log2 ratio)
-2
-1
0
1 at 2607.106 kb on - strand at 2607.148 kb on + strand at 2607.221 kb on + strand at 2607.238 kb on + strand at 2607.238 kb on + strand at 2607.238 kb on + strand at 2607.239 kb on - strand at 2607.239 kb on - strand at 2607.239 kb on - strand at 2607.239 kb on - strand at 2607.239 kb on - strand at 2607.239 kb on - strand at 2607.239 kb on - strand at 2607.328 kb on + strand, within Ga0059261_2515 at 2607.328 kb on + strand, within Ga0059261_2515 at 2607.329 kb on - strand, within Ga0059261_2515 at 2607.337 kb on + strand, within Ga0059261_2515 at 2607.338 kb on - strand, within Ga0059261_2515 at 2607.347 kb on - strand, within Ga0059261_2515 at 2607.490 kb on + strand, within Ga0059261_2515 at 2607.491 kb on - strand, within Ga0059261_2515 at 2607.491 kb on - strand, within Ga0059261_2515 at 2607.491 kb on - strand, within Ga0059261_2515 at 2607.496 kb on + strand, within Ga0059261_2515 at 2607.497 kb on - strand, within Ga0059261_2515 at 2607.497 kb on - strand, within Ga0059261_2515 at 2607.497 kb on - strand, within Ga0059261_2515 at 2607.497 kb on - strand, within Ga0059261_2515 at 2607.602 kb on + strand, within Ga0059261_2515 at 2607.602 kb on + strand, within Ga0059261_2515 at 2607.602 kb on + strand, within Ga0059261_2515 at 2607.602 kb on + strand, within Ga0059261_2515 at 2607.602 kb on + strand, within Ga0059261_2515 at 2607.602 kb on + strand, within Ga0059261_2515 at 2607.602 kb on + strand, within Ga0059261_2515 at 2607.603 kb on - strand, within Ga0059261_2515 at 2607.603 kb on - strand, within Ga0059261_2515 at 2607.603 kb on - strand, within Ga0059261_2515 at 2607.603 kb on - strand, within Ga0059261_2515 at 2607.603 kb on - strand, within Ga0059261_2515 at 2607.603 kb on - strand, within Ga0059261_2515 at 2607.604 kb on + strand, within Ga0059261_2515 at 2607.604 kb on + strand at 2607.604 kb on + strand, within Ga0059261_2515 at 2607.605 kb on - strand, within Ga0059261_2515 at 2607.712 kb on + strand, within Ga0059261_2515 at 2607.712 kb on + strand, within Ga0059261_2515 at 2607.713 kb on - strand, within Ga0059261_2515 at 2607.713 kb on - strand, within Ga0059261_2515 at 2607.713 kb on - strand, within Ga0059261_2515 at 2607.916 kb on + strand at 2607.916 kb on + strand at 2607.917 kb on - strand at 2607.917 kb on - strand at 2607.917 kb on - strand at 2607.917 kb on - strand at 2607.921 kb on - strand at 2607.933 kb on - strand at 2609.046 kb on + strand at 2609.046 kb on + strand at 2609.046 kb on + strand at 2609.046 kb on + strand at 2609.046 kb on + strand at 2609.046 kb on + strand at 2609.047 kb on - strand at 2609.180 kb on + strand, within Ga0059261_2517 at 2609.180 kb on + strand, within Ga0059261_2517 at 2609.354 kb on + strand, within Ga0059261_2517 at 2609.355 kb on - strand, within Ga0059261_2517 at 2609.355 kb on - strand, within Ga0059261_2517 at 2609.599 kb on + strand, within Ga0059261_2517 at 2609.600 kb on - strand, within Ga0059261_2517 at 2609.600 kb on - strand, within Ga0059261_2517 at 2609.674 kb on + strand, within Ga0059261_2517 at 2609.674 kb on + strand, within Ga0059261_2517 at 2609.674 kb on + strand, within Ga0059261_2517 at 2609.674 kb on + strand, within Ga0059261_2517 at 2609.674 kb on + strand, within Ga0059261_2517 at 2609.674 kb on + strand, within Ga0059261_2517 at 2609.674 kb on + strand, within Ga0059261_2517 at 2609.675 kb on - strand, within Ga0059261_2517 at 2609.675 kb on - strand, within Ga0059261_2517 at 2609.675 kb on - strand, within Ga0059261_2517 at 2609.678 kb on + strand, within Ga0059261_2517 at 2609.678 kb on + strand, within Ga0059261_2517 at 2609.678 kb on + strand, within Ga0059261_2517 at 2609.679 kb on + strand, within Ga0059261_2517 at 2609.679 kb on - strand, within Ga0059261_2517 at 2609.679 kb on - strand, within Ga0059261_2517 at 2609.679 kb on - strand, within Ga0059261_2517 at 2609.679 kb on - strand, within Ga0059261_2517 at 2609.679 kb on - strand, within Ga0059261_2517 at 2609.679 kb on - strand, within Ga0059261_2517 at 2609.679 kb on - strand, within Ga0059261_2517 at 2609.679 kb on - strand, within Ga0059261_2517 at 2609.679 kb on - strand, within Ga0059261_2517 at 2609.679 kb on - strand, within Ga0059261_2517 at 2609.770 kb on + strand, within Ga0059261_2517 at 2609.770 kb on + strand, within Ga0059261_2517 at 2609.770 kb on + strand, within Ga0059261_2517 at 2609.771 kb on - strand, within Ga0059261_2517 at 2609.771 kb on - strand, within Ga0059261_2517 at 2609.771 kb on - strand, within Ga0059261_2517 at 2609.771 kb on - strand, within Ga0059261_2517 at 2609.771 kb on - strand, within Ga0059261_2517 at 2609.771 kb on - strand, within Ga0059261_2517 at 2609.790 kb on - strand, within Ga0059261_2517 at 2609.790 kb on - strand, within Ga0059261_2517 at 2609.925 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 2,607,106 - -0.3 2,607,148 + +1.3 2,607,221 + +0.5 2,607,238 + +0.0 2,607,238 + -0.9 2,607,238 + -0.1 2,607,239 - +0.8 2,607,239 - +0.2 2,607,239 - -0.8 2,607,239 - +0.0 2,607,239 - -0.5 2,607,239 - +0.0 2,607,239 - -0.1 2,607,328 + Ga0059261_2515 0.22 +0.2 2,607,328 + Ga0059261_2515 0.22 -0.1 2,607,329 - Ga0059261_2515 0.22 +0.2 2,607,337 + Ga0059261_2515 0.23 +0.0 2,607,338 - Ga0059261_2515 0.23 -0.6 2,607,347 - Ga0059261_2515 0.24 -0.2 2,607,490 + Ga0059261_2515 0.44 -0.1 2,607,491 - Ga0059261_2515 0.44 +0.2 2,607,491 - Ga0059261_2515 0.44 -0.4 2,607,491 - Ga0059261_2515 0.44 +0.1 2,607,496 + Ga0059261_2515 0.45 +0.0 2,607,497 - Ga0059261_2515 0.45 -1.3 2,607,497 - Ga0059261_2515 0.45 -0.6 2,607,497 - Ga0059261_2515 0.45 -0.1 2,607,497 - Ga0059261_2515 0.45 +0.0 2,607,602 + Ga0059261_2515 0.59 -0.8 2,607,602 + Ga0059261_2515 0.59 -0.2 2,607,602 + Ga0059261_2515 0.59 +0.3 2,607,602 + Ga0059261_2515 0.59 +0.3 2,607,602 + Ga0059261_2515 0.59 +0.9 2,607,602 + Ga0059261_2515 0.59 -0.3 2,607,602 + Ga0059261_2515 0.59 -0.1 2,607,603 - Ga0059261_2515 0.60 -0.7 2,607,603 - Ga0059261_2515 0.60 +0.5 2,607,603 - Ga0059261_2515 0.60 +0.3 2,607,603 - Ga0059261_2515 0.60 -0.2 2,607,603 - Ga0059261_2515 0.60 +0.7 2,607,603 - Ga0059261_2515 0.60 +0.2 2,607,604 + Ga0059261_2515 0.60 -0.5 2,607,604 + +1.3 2,607,604 + Ga0059261_2515 0.60 +0.1 2,607,605 - Ga0059261_2515 0.60 +0.3 2,607,712 + Ga0059261_2515 0.75 -0.4 2,607,712 + Ga0059261_2515 0.75 +0.1 2,607,713 - Ga0059261_2515 0.75 -0.4 2,607,713 - Ga0059261_2515 0.75 +0.0 2,607,713 - Ga0059261_2515 0.75 +0.2 2,607,916 + +0.3 2,607,916 + -0.0 2,607,917 - -0.0 2,607,917 - +0.4 2,607,917 - +0.2 2,607,917 - -0.2 2,607,921 - +0.1 2,607,933 - -0.5 2,609,046 + -0.3 2,609,046 + -0.3 2,609,046 + +0.9 2,609,046 + -0.2 2,609,046 + -1.0 2,609,046 + -1.0 2,609,047 - -0.3 2,609,180 + Ga0059261_2517 0.14 +0.3 2,609,180 + Ga0059261_2517 0.14 +0.0 2,609,354 + Ga0059261_2517 0.35 +0.6 2,609,355 - Ga0059261_2517 0.35 -0.2 2,609,355 - Ga0059261_2517 0.35 -0.1 2,609,599 + Ga0059261_2517 0.63 +0.1 2,609,600 - Ga0059261_2517 0.64 +0.3 2,609,600 - Ga0059261_2517 0.64 +0.7 2,609,674 + Ga0059261_2517 0.72 +0.0 2,609,674 + Ga0059261_2517 0.72 -0.1 2,609,674 + Ga0059261_2517 0.72 +0.5 2,609,674 + Ga0059261_2517 0.72 -0.4 2,609,674 + Ga0059261_2517 0.72 +0.9 2,609,674 + Ga0059261_2517 0.72 +0.3 2,609,674 + Ga0059261_2517 0.72 +0.5 2,609,675 - Ga0059261_2517 0.72 +0.2 2,609,675 - Ga0059261_2517 0.72 -0.3 2,609,675 - Ga0059261_2517 0.72 -1.7 2,609,678 + Ga0059261_2517 0.73 +0.3 2,609,678 + Ga0059261_2517 0.73 +0.3 2,609,678 + Ga0059261_2517 0.73 +0.4 2,609,679 + Ga0059261_2517 0.73 -0.1 2,609,679 - Ga0059261_2517 0.73 -0.2 2,609,679 - Ga0059261_2517 0.73 -1.5 2,609,679 - Ga0059261_2517 0.73 -1.8 2,609,679 - Ga0059261_2517 0.73 +0.4 2,609,679 - Ga0059261_2517 0.73 -0.1 2,609,679 - Ga0059261_2517 0.73 +0.4 2,609,679 - Ga0059261_2517 0.73 -0.4 2,609,679 - Ga0059261_2517 0.73 +1.5 2,609,679 - Ga0059261_2517 0.73 +0.3 2,609,679 - Ga0059261_2517 0.73 -0.1 2,609,770 + Ga0059261_2517 0.84 +0.6 2,609,770 + Ga0059261_2517 0.84 +0.5 2,609,770 + Ga0059261_2517 0.84 +0.6 2,609,771 - Ga0059261_2517 0.84 +1.0 2,609,771 - Ga0059261_2517 0.84 +0.6 2,609,771 - Ga0059261_2517 0.84 -0.6 2,609,771 - Ga0059261_2517 0.84 +0.0 2,609,771 - Ga0059261_2517 0.84 +0.7 2,609,771 - Ga0059261_2517 0.84 -0.1 2,609,790 - Ga0059261_2517 0.86 -0.2 2,609,790 - Ga0059261_2517 0.86 -0.6 2,609,925 - -0.8
Or see this region's nucleotide sequence