Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02824

Experiment: PYE with A22 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with A22 0.005 mg/ml
2,979,581	-				+1.8
2,979,589	-				-1.2
2,979,589	-				-0.7
2,979,798	+				+0.2
2,979,811	+				-1.6
2,979,816	+				+1.1
2,979,816	+				-2.6
2,979,818	+		CCNA_03979	0.58	-0.3
2,979,824	-		CCNA_03979	0.60	+1.5
2,979,829	-		CCNA_03979	0.63	+0.3
2,979,854	+		CCNA_03979	0.74	-0.2
2,979,873	+		CCNA_03979	0.82	+0.1
2,979,881	+		CCNA_03979	0.86	-1.8
2,979,932	-		CCNA_02823	0.16	+2.2
2,979,941	+		CCNA_02823	0.23	-0.9
2,979,941	+		CCNA_02823	0.23	-1.5
2,979,947	-		CCNA_02823	0.28	+0.8
2,979,970	+		CCNA_02823	0.46	+0.2
2,979,970	+		CCNA_02823	0.46	-0.3
2,979,970	+		CCNA_02823	0.46	+1.1
2,979,978	-		CCNA_02823	0.52	-1.2
2,979,999	-		CCNA_02823	0.69	-0.9
2,980,069	-				+0.0
2,980,100	+				+1.5
2,980,108	-				+0.3
2,980,108	-				+0.5
2,980,108	-				+0.3
2,980,108	-				+1.4
2,980,108	-				+0.3
2,980,138	-				+0.8
2,980,153	+				-1.5
2,980,153	+				-1.2
2,980,153	+				+0.5
2,980,153	+				-0.8
2,980,156	-				+0.3
2,980,156	-				-0.1
2,980,161	-				-0.5
2,980,168	+				-1.4
2,980,173	+				+0.2
2,980,178	+				-0.2
2,980,179	-				-0.2
2,980,203	-				-1.8
2,980,219	+				-2.6
2,980,259	+		CCNA_02824	0.10	+0.5
2,980,267	-		CCNA_02824	0.13	-0.2
2,980,267	-		CCNA_02824	0.13	-0.9
2,980,267	-		CCNA_02824	0.13	-1.0
2,980,303	-		CCNA_02824	0.23	-0.2
2,980,341	-		CCNA_02824	0.34	-0.2
2,980,341	-		CCNA_02824	0.34	-1.1
2,980,341	-		CCNA_02824	0.34	-0.5
2,980,343	+		CCNA_02824	0.34	-2.0
2,980,343	+		CCNA_02824	0.34	-0.2
2,980,349	-		CCNA_02824	0.36	+0.3
2,980,351	-		CCNA_02824	0.36	-0.2
2,980,359	-		CCNA_02824	0.39	-0.7
2,980,370	+		CCNA_02824	0.42	-0.2
2,980,423	-		CCNA_02824	0.57	+0.2
2,980,437	+		CCNA_02824	0.61	+0.4
2,980,469	+		CCNA_02824	0.70	-0.7
2,980,472	-		CCNA_02824	0.71	-1.9
2,980,472	-		CCNA_02824	0.71	-0.2
2,980,493	+		CCNA_02824	0.77	-0.4
2,980,505	+		CCNA_02824	0.80	-3.1
2,980,506	-		CCNA_02824	0.80	-0.6
2,980,521	-		CCNA_02824	0.84	-1.2
2,980,539	+		CCNA_02824	0.90	-1.0
2,980,553	+				-0.4
2,980,556	-				+0.2
2,980,586	+				-0.9
2,980,594	-				-2.2
2,980,595	+				-0.1
2,980,595	-				-0.5
2,980,629	+		CCNA_02825	0.11	-0.5
2,980,659	-		CCNA_02825	0.19	+1.0
2,980,659	-		CCNA_02825	0.19	+1.4
2,980,666	-		CCNA_02825	0.20	-0.5
2,980,679	-		CCNA_02825	0.24	-0.2
2,980,702	+		CCNA_02825	0.30	+0.3
2,980,715	+		CCNA_02825	0.33	-3.2
2,980,727	-		CCNA_02825	0.36	+0.9
2,980,738	-		CCNA_02825	0.39	+0.3
2,980,753	+		CCNA_02825	0.42	-0.6
2,980,760	-		CCNA_02825	0.44	-0.7
2,980,785	+		CCNA_02825	0.51	-0.4
2,980,785	+		CCNA_02825	0.51	-1.8
2,980,793	-		CCNA_02825	0.53	+2.3
2,980,835	+		CCNA_02825	0.63	+0.3
2,980,843	-		CCNA_02825	0.65	+0.5
2,980,877	+		CCNA_02825	0.74	+0.1
2,980,879	+		CCNA_02825	0.75	+0.1
2,980,879	+		CCNA_02825	0.75	+1.1
2,980,885	-		CCNA_02825	0.76	-1.6
2,980,885	-		CCNA_02825	0.76	+1.0
2,980,886	+		CCNA_02825	0.76	-1.1
2,980,887	-		CCNA_02825	0.77	+2.1
2,980,887	-		CCNA_02825	0.77	-0.2
2,980,887	-		CCNA_02825	0.77	+0.3
2,980,894	+		CCNA_02825	0.78	+0.8
2,980,917	+		CCNA_02825	0.84	-0.2
2,980,917	+		CCNA_02825	0.84	-0.1
2,980,917	+		CCNA_02825	0.84	-0.9
2,980,925	-		CCNA_02825	0.86	-1.4
2,980,960	+				-1.7
2,980,968	-				-0.2
2,980,988	+				+1.1
2,980,996	-				-0.1
2,981,006	-				+2.1
2,981,025	+				-0.6
2,981,035	+				+1.4
2,981,035	+				+1.0
2,981,049	-				+0.3
2,981,059	+				+1.2
2,981,067	-				-0.7
2,981,100	+				+0.5
2,981,117	-				+0.7
2,981,136	-				+1.5
2,981,138	+				+0.3
2,981,138	+				+2.4
2,981,146	-				+1.7
2,981,146	-				+4.1
2,981,146	-				-1.8
2,981,170	+				-0.6
2,981,178	-				-1.2
2,981,191	-				-0.1
2,981,191	-				-1.1
2,981,192	-				-1.0
2,981,194	+				-1.5
2,981,255	-		CCNA_02826	0.14	-2.9
2,981,257	+		CCNA_02826	0.14	-0.4
2,981,257	+		CCNA_02826	0.14	+0.8
2,981,257	+				+1.1
2,981,265	-		CCNA_02826	0.15	-0.4
2,981,277	+		CCNA_02826	0.16	+0.6
2,981,282	+		CCNA_02826	0.17	+0.0
2,981,304	+		CCNA_02826	0.19	+0.6
2,981,304	+		CCNA_02826	0.19	+0.1
2,981,312	-		CCNA_02826	0.20	-1.4
2,981,312	-		CCNA_02826	0.20	+0.5
2,981,338	+		CCNA_02826	0.22	-0.6
2,981,339	-		CCNA_02826	0.22	-0.1
2,981,339	-		CCNA_02826	0.22	+0.7
2,981,346	-		CCNA_02826	0.23	-0.9
2,981,346	-		CCNA_02826	0.23	-1.4
2,981,346	-		CCNA_02826	0.23	+0.5
2,981,349	+		CCNA_02826	0.23	+1.3
2,981,349	-		CCNA_02826	0.23	-1.2
2,981,356	-		CCNA_02826	0.24	+1.1
2,981,366	+		CCNA_02826	0.25	+0.2
2,981,411	-		CCNA_02826	0.30	-0.2
2,981,416	-		CCNA_02826	0.30	+0.9
2,981,426	+		CCNA_02826	0.31	+0.8
2,981,443	+		CCNA_02826	0.33	-0.7
2,981,448	-		CCNA_02826	0.33	+0.9
2,981,468	-		CCNA_02826	0.35	-2.3
2,981,469	-		CCNA_02826	0.35	-1.7
2,981,472	+		CCNA_02826	0.35	-1.0
2,981,474	-		CCNA_02826	0.36	-1.4
2,981,479	+		CCNA_02826	0.36	-1.2
2,981,486	+		CCNA_02826	0.37	+0.6
2,981,516	-		CCNA_02826	0.40	-0.2
2,981,550	-		CCNA_02826	0.43	+0.3
2,981,560	-		CCNA_02826	0.44	-1.0
2,981,567	-		CCNA_02826	0.45	+1.9