Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01758
Experiment: PYE with A22 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | PYE with A22 0.005 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,883,631 | + | CCNA_01756 | 0.80 | -0.1 | |
1,883,636 | + | CCNA_01756 | 0.84 | -2.7 | |
1,883,676 | - | +1.8 | |||
1,883,726 | - | +0.6 | |||
1,883,738 | + | -2.0 | |||
1,883,943 | - | CCNA_01757 | 0.27 | -0.7 | |
1,884,027 | - | CCNA_01757 | 0.37 | -1.8 | |
1,884,037 | - | CCNA_01757 | 0.38 | -1.7 | |
1,884,357 | - | CCNA_01757 | 0.77 | -1.0 | |
1,884,383 | - | CCNA_01757 | 0.80 | -0.8 | |
1,884,556 | + | +0.6 | |||
1,884,556 | + | +0.5 | |||
1,884,586 | - | +2.0 | |||
1,884,598 | - | +0.3 | |||
1,884,598 | - | +0.4 | |||
1,884,598 | - | +0.9 | |||
1,885,596 | - | +1.3 |
Or see this region's nucleotide sequence