Experiment: Chloramphenicol 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3179 and Ac3H11_3180 are separated by 66 nucleotides Ac3H11_3180 and Ac3H11_3181 are separated by 6 nucleotides
Ac3H11_3179 - Chromosome initiation inhibitor, at 80,563 to 81,462
_3179
Ac3H11_3180 - Benzoylformate decarboxylase (EC 4.1.1.7), at 81,529 to 83,127
_3180
Ac3H11_3181 - Tricarboxylate transport protein TctC, at 83,134 to 84,216
_3181
Position (kb) 81
82
83
84 Strain fitness (log2 ratio) -1
0
1 at 80.690 kb on + strand, within Ac3H11_3179 at 80.691 kb on - strand, within Ac3H11_3179 at 80.691 kb on - strand, within Ac3H11_3179 at 80.691 kb on - strand, within Ac3H11_3179 at 80.722 kb on - strand, within Ac3H11_3179 at 80.947 kb on + strand, within Ac3H11_3179 at 80.948 kb on - strand, within Ac3H11_3179 at 80.948 kb on - strand, within Ac3H11_3179 at 80.948 kb on - strand, within Ac3H11_3179 at 81.456 kb on + strand at 81.671 kb on - strand at 81.976 kb on + strand, within Ac3H11_3180 at 81.977 kb on - strand, within Ac3H11_3180 at 81.977 kb on - strand, within Ac3H11_3180 at 81.977 kb on - strand, within Ac3H11_3180 at 81.979 kb on + strand, within Ac3H11_3180 at 81.979 kb on + strand, within Ac3H11_3180 at 81.979 kb on + strand, within Ac3H11_3180 at 81.979 kb on + strand, within Ac3H11_3180 at 81.979 kb on + strand, within Ac3H11_3180 at 81.979 kb on + strand, within Ac3H11_3180 at 81.980 kb on - strand, within Ac3H11_3180 at 81.980 kb on - strand, within Ac3H11_3180 at 81.980 kb on - strand, within Ac3H11_3180 at 81.980 kb on - strand, within Ac3H11_3180 at 81.980 kb on - strand, within Ac3H11_3180 at 81.980 kb on - strand, within Ac3H11_3180 at 81.980 kb on - strand, within Ac3H11_3180 at 81.980 kb on - strand, within Ac3H11_3180 at 81.980 kb on - strand, within Ac3H11_3180 at 81.980 kb on - strand, within Ac3H11_3180 at 82.375 kb on + strand, within Ac3H11_3180 at 82.376 kb on - strand, within Ac3H11_3180 at 82.376 kb on - strand, within Ac3H11_3180 at 82.376 kb on - strand, within Ac3H11_3180 at 82.376 kb on - strand, within Ac3H11_3180 at 82.612 kb on + strand, within Ac3H11_3180 at 82.612 kb on + strand, within Ac3H11_3180 at 82.612 kb on + strand, within Ac3H11_3180 at 82.612 kb on + strand, within Ac3H11_3180 at 82.612 kb on + strand, within Ac3H11_3180 at 82.616 kb on + strand, within Ac3H11_3180 at 82.616 kb on + strand, within Ac3H11_3180 at 82.616 kb on + strand, within Ac3H11_3180 at 82.616 kb on + strand, within Ac3H11_3180 at 82.616 kb on + strand, within Ac3H11_3180 at 82.616 kb on + strand, within Ac3H11_3180 at 82.616 kb on + strand, within Ac3H11_3180 at 82.617 kb on - strand, within Ac3H11_3180 at 82.617 kb on - strand, within Ac3H11_3180 at 82.699 kb on + strand, within Ac3H11_3180 at 82.729 kb on + strand, within Ac3H11_3180 at 82.729 kb on + strand, within Ac3H11_3180 at 82.729 kb on + strand, within Ac3H11_3180 at 82.730 kb on - strand, within Ac3H11_3180 at 82.730 kb on - strand, within Ac3H11_3180 at 82.730 kb on - strand, within Ac3H11_3180 at 82.756 kb on + strand, within Ac3H11_3180 at 82.756 kb on + strand, within Ac3H11_3180 at 82.757 kb on - strand, within Ac3H11_3180 at 82.840 kb on + strand, within Ac3H11_3180 at 82.840 kb on + strand, within Ac3H11_3180 at 82.840 kb on + strand, within Ac3H11_3180 at 82.840 kb on + strand, within Ac3H11_3180 at 82.840 kb on + strand, within Ac3H11_3180 at 82.840 kb on + strand, within Ac3H11_3180 at 82.840 kb on + strand, within Ac3H11_3180 at 82.841 kb on - strand, within Ac3H11_3180 at 82.841 kb on - strand, within Ac3H11_3180 at 82.841 kb on - strand, within Ac3H11_3180 at 82.841 kb on - strand, within Ac3H11_3180 at 82.841 kb on - strand, within Ac3H11_3180 at 83.224 kb on + strand at 83.506 kb on + strand, within Ac3H11_3181 at 83.507 kb on - strand, within Ac3H11_3181 at 83.507 kb on - strand, within Ac3H11_3181 at 83.680 kb on + strand, within Ac3H11_3181 at 83.680 kb on + strand, within Ac3H11_3181 at 83.681 kb on - strand, within Ac3H11_3181 at 83.681 kb on - strand, within Ac3H11_3181 at 84.007 kb on + strand, within Ac3H11_3181 at 84.007 kb on + strand, within Ac3H11_3181 at 84.008 kb on - strand, within Ac3H11_3181
Per-strain Table
Position Strand Gene LocusTag Fraction Chloramphenicol 0.0005 mg/ml remove 80,690 + Ac3H11_3179 0.14 -0.4 80,691 - Ac3H11_3179 0.14 -0.6 80,691 - Ac3H11_3179 0.14 +0.3 80,691 - Ac3H11_3179 0.14 -0.6 80,722 - Ac3H11_3179 0.18 -0.5 80,947 + Ac3H11_3179 0.43 +1.6 80,948 - Ac3H11_3179 0.43 +0.3 80,948 - Ac3H11_3179 0.43 +0.3 80,948 - Ac3H11_3179 0.43 +0.1 81,456 + +1.3 81,671 - +0.3 81,976 + Ac3H11_3180 0.28 -1.4 81,977 - Ac3H11_3180 0.28 -1.3 81,977 - Ac3H11_3180 0.28 -0.6 81,977 - Ac3H11_3180 0.28 -0.0 81,979 + Ac3H11_3180 0.28 -1.4 81,979 + Ac3H11_3180 0.28 -0.3 81,979 + Ac3H11_3180 0.28 -0.5 81,979 + Ac3H11_3180 0.28 +0.2 81,979 + Ac3H11_3180 0.28 -1.1 81,979 + Ac3H11_3180 0.28 +1.2 81,980 - Ac3H11_3180 0.28 +0.5 81,980 - Ac3H11_3180 0.28 +0.4 81,980 - Ac3H11_3180 0.28 +0.2 81,980 - Ac3H11_3180 0.28 -0.3 81,980 - Ac3H11_3180 0.28 +0.2 81,980 - Ac3H11_3180 0.28 +0.4 81,980 - Ac3H11_3180 0.28 -0.4 81,980 - Ac3H11_3180 0.28 +0.7 81,980 - Ac3H11_3180 0.28 -0.4 81,980 - Ac3H11_3180 0.28 -1.0 82,375 + Ac3H11_3180 0.53 -0.6 82,376 - Ac3H11_3180 0.53 +0.7 82,376 - Ac3H11_3180 0.53 +0.1 82,376 - Ac3H11_3180 0.53 +0.9 82,376 - Ac3H11_3180 0.53 +0.0 82,612 + Ac3H11_3180 0.68 -0.4 82,612 + Ac3H11_3180 0.68 +0.5 82,612 + Ac3H11_3180 0.68 -0.0 82,612 + Ac3H11_3180 0.68 -0.3 82,612 + Ac3H11_3180 0.68 +0.1 82,616 + Ac3H11_3180 0.68 +1.3 82,616 + Ac3H11_3180 0.68 +0.1 82,616 + Ac3H11_3180 0.68 -0.7 82,616 + Ac3H11_3180 0.68 +0.9 82,616 + Ac3H11_3180 0.68 +0.6 82,616 + Ac3H11_3180 0.68 -0.0 82,616 + Ac3H11_3180 0.68 -0.3 82,617 - Ac3H11_3180 0.68 -0.9 82,617 - Ac3H11_3180 0.68 -0.5 82,699 + Ac3H11_3180 0.73 -0.8 82,729 + Ac3H11_3180 0.75 +0.3 82,729 + Ac3H11_3180 0.75 +0.4 82,729 + Ac3H11_3180 0.75 +0.7 82,730 - Ac3H11_3180 0.75 +0.4 82,730 - Ac3H11_3180 0.75 +0.2 82,730 - Ac3H11_3180 0.75 -0.4 82,756 + Ac3H11_3180 0.77 -0.5 82,756 + Ac3H11_3180 0.77 +0.3 82,757 - Ac3H11_3180 0.77 -0.6 82,840 + Ac3H11_3180 0.82 -1.3 82,840 + Ac3H11_3180 0.82 +1.0 82,840 + Ac3H11_3180 0.82 -1.3 82,840 + Ac3H11_3180 0.82 -0.6 82,840 + Ac3H11_3180 0.82 +1.1 82,840 + Ac3H11_3180 0.82 -0.9 82,840 + Ac3H11_3180 0.82 +1.1 82,841 - Ac3H11_3180 0.82 -0.4 82,841 - Ac3H11_3180 0.82 -0.6 82,841 - Ac3H11_3180 0.82 +0.2 82,841 - Ac3H11_3180 0.82 +0.3 82,841 - Ac3H11_3180 0.82 -0.5 83,224 + +0.0 83,506 + Ac3H11_3181 0.34 -0.4 83,507 - Ac3H11_3181 0.34 +0.4 83,507 - Ac3H11_3181 0.34 +0.6 83,680 + Ac3H11_3181 0.50 -0.3 83,680 + Ac3H11_3181 0.50 +0.2 83,681 - Ac3H11_3181 0.51 +0.2 83,681 - Ac3H11_3181 0.51 +0.4 84,007 + Ac3H11_3181 0.81 -0.2 84,007 + Ac3H11_3181 0.81 +0.6 84,008 - Ac3H11_3181 0.81 -0.1
Or see this region's nucleotide sequence