Experiment: L-Leucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS30590 and AZOBR_RS30595 are separated by 83 nucleotides AZOBR_RS30595 and AZOBR_RS30600 are separated by 176 nucleotides AZOBR_RS30600 and AZOBR_RS30605 are separated by 491 nucleotides
AZOBR_RS30590: AZOBR_RS30590 - glutathionylspermidine synthase, at 219,778 to 220,944
_RS30590
AZOBR_RS30595: AZOBR_RS30595 - hypothetical protein, at 221,028 to 221,252
_RS30595
AZOBR_RS30600: AZOBR_RS30600 - polyhydroxyalkanoate synthesis repressor, at 221,429 to 222,067
_RS30600
AZOBR_RS30605: AZOBR_RS30605 - poly-beta-hydroxybutyrate polymerase, at 222,559 to 223,797
_RS30605
Position (kb) 221
222
223 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 220.483 kb on + strand, within AZOBR_RS30590 at 220.483 kb on + strand, within AZOBR_RS30590 at 220.484 kb on - strand, within AZOBR_RS30590 at 221.493 kb on + strand, within AZOBR_RS30600 at 222.000 kb on + strand, within AZOBR_RS30600 at 222.001 kb on - strand at 222.018 kb on + strand at 222.113 kb on - strand at 222.115 kb on - strand at 222.122 kb on - strand at 222.122 kb on - strand at 222.257 kb on + strand at 222.257 kb on + strand at 222.257 kb on + strand at 222.257 kb on + strand at 222.257 kb on + strand at 222.257 kb on + strand at 222.257 kb on + strand at 222.257 kb on + strand at 222.257 kb on + strand at 222.257 kb on + strand at 222.257 kb on + strand at 222.257 kb on + strand at 222.257 kb on + strand at 222.258 kb on - strand at 222.258 kb on - strand at 222.258 kb on - strand at 222.258 kb on - strand at 222.259 kb on + strand at 222.260 kb on - strand at 222.260 kb on - strand at 222.260 kb on - strand at 222.324 kb on + strand at 222.325 kb on - strand at 222.465 kb on + strand at 222.466 kb on - strand at 222.973 kb on + strand, within AZOBR_RS30605 at 222.973 kb on + strand, within AZOBR_RS30605 at 222.974 kb on - strand, within AZOBR_RS30605 at 222.974 kb on - strand, within AZOBR_RS30605
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (C) remove 220,483 + AZOBR_RS30590 0.60 +0.1 220,483 + AZOBR_RS30590 0.60 +0.4 220,484 - AZOBR_RS30590 0.60 +0.2 221,493 + AZOBR_RS30600 0.10 +0.7 222,000 + AZOBR_RS30600 0.89 -2.0 222,001 - -0.2 222,018 + -2.9 222,113 - +0.8 222,115 - +0.8 222,122 - -0.2 222,122 - +0.9 222,257 + +0.2 222,257 + +0.5 222,257 + -0.1 222,257 + -0.7 222,257 + +0.4 222,257 + +0.6 222,257 + +0.2 222,257 + +0.2 222,257 + -0.4 222,257 + +0.1 222,257 + -0.3 222,257 + +0.3 222,257 + +0.3 222,258 - -1.0 222,258 - -1.1 222,258 - +0.4 222,258 - -2.1 222,259 + -0.2 222,260 - +0.0 222,260 - -0.6 222,260 - -0.3 222,324 + -0.4 222,325 - -1.4 222,465 + -0.0 222,466 - -0.5 222,973 + AZOBR_RS30605 0.33 -1.8 222,973 + AZOBR_RS30605 0.33 +1.3 222,974 - AZOBR_RS30605 0.33 -1.4 222,974 - AZOBR_RS30605 0.33 -2.7
Or see this region's nucleotide sequence