Experiment: L-Leucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS10140 and AZOBR_RS10145 are separated by 209 nucleotides AZOBR_RS10145 and AZOBR_RS10150 overlap by 4 nucleotides AZOBR_RS10150 and AZOBR_RS10155 are separated by 9 nucleotides
AZOBR_RS10140: AZOBR_RS10140 - siroheme synthase, at 2,119,727 to 2,120,284
_RS10140
AZOBR_RS10145: AZOBR_RS10145 - phosphoadenosine phosphosulfate reductase, at 2,120,494 to 2,121,228
_RS10145
AZOBR_RS10150: AZOBR_RS10150 - sulfate adenylyltransferase, at 2,121,225 to 2,122,022
_RS10150
AZOBR_RS10155: AZOBR_RS10155 - NodQ bifunctional enzyme, at 2,122,032 to 2,123,915
_RS10155
Position (kb)
2121
2122
2123 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 2120.554 kb on + strand at 2120.555 kb on - strand at 2121.244 kb on - strand at 2121.264 kb on + strand at 2121.264 kb on + strand at 2121.264 kb on + strand at 2121.264 kb on + strand at 2121.264 kb on + strand at 2121.264 kb on + strand at 2121.264 kb on + strand at 2121.264 kb on + strand at 2121.265 kb on - strand at 2121.265 kb on - strand at 2121.265 kb on - strand at 2121.282 kb on + strand at 2121.283 kb on - strand at 2121.283 kb on - strand at 2121.427 kb on - strand, within AZOBR_RS10150 at 2121.582 kb on + strand, within AZOBR_RS10150 at 2121.711 kb on + strand, within AZOBR_RS10150 at 2121.712 kb on - strand, within AZOBR_RS10150 at 2121.712 kb on - strand, within AZOBR_RS10150 at 2121.712 kb on - strand, within AZOBR_RS10150 at 2121.826 kb on - strand, within AZOBR_RS10150 at 2121.826 kb on - strand, within AZOBR_RS10150 at 2121.826 kb on - strand, within AZOBR_RS10150 at 2121.826 kb on - strand, within AZOBR_RS10150 at 2122.014 kb on + strand at 2122.014 kb on + strand at 2122.015 kb on - strand at 2122.020 kb on + strand at 2122.020 kb on + strand at 2122.020 kb on + strand at 2122.020 kb on + strand at 2122.020 kb on + strand at 2122.020 kb on + strand at 2122.020 kb on + strand at 2122.021 kb on - strand at 2122.021 kb on - strand at 2122.021 kb on - strand at 2122.021 kb on - strand at 2122.305 kb on + strand, within AZOBR_RS10155 at 2122.305 kb on + strand, within AZOBR_RS10155 at 2122.306 kb on - strand, within AZOBR_RS10155 at 2122.306 kb on - strand, within AZOBR_RS10155 at 2122.549 kb on - strand, within AZOBR_RS10155 at 2122.737 kb on + strand, within AZOBR_RS10155 at 2122.737 kb on + strand, within AZOBR_RS10155 at 2122.738 kb on - strand, within AZOBR_RS10155 at 2122.974 kb on + strand, within AZOBR_RS10155 at 2122.974 kb on + strand, within AZOBR_RS10155 at 2122.975 kb on - strand, within AZOBR_RS10155 at 2122.975 kb on - strand, within AZOBR_RS10155
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (C) remove 2,120,554 + -1.2 2,120,555 - -2.9 2,121,244 - -2.9 2,121,264 + -2.9 2,121,264 + -0.2 2,121,264 + -1.2 2,121,264 + -3.3 2,121,264 + -3.6 2,121,264 + -3.6 2,121,264 + -1.9 2,121,264 + -2.4 2,121,265 - -3.7 2,121,265 - -4.4 2,121,265 - -2.0 2,121,282 + -3.5 2,121,283 - -4.2 2,121,283 - -3.1 2,121,427 - AZOBR_RS10150 0.25 -1.5 2,121,582 + AZOBR_RS10150 0.45 -1.8 2,121,711 + AZOBR_RS10150 0.61 -5.7 2,121,712 - AZOBR_RS10150 0.61 -3.2 2,121,712 - AZOBR_RS10150 0.61 -4.0 2,121,712 - AZOBR_RS10150 0.61 -3.1 2,121,826 - AZOBR_RS10150 0.75 -2.8 2,121,826 - AZOBR_RS10150 0.75 -1.2 2,121,826 - AZOBR_RS10150 0.75 -1.4 2,121,826 - AZOBR_RS10150 0.75 -0.4 2,122,014 + -5.0 2,122,014 + -3.0 2,122,015 - -3.4 2,122,020 + -1.6 2,122,020 + +0.3 2,122,020 + -0.6 2,122,020 + -1.2 2,122,020 + -2.0 2,122,020 + +0.9 2,122,020 + -1.4 2,122,021 - -5.0 2,122,021 - -3.2 2,122,021 - -3.3 2,122,021 - -0.8 2,122,305 + AZOBR_RS10155 0.14 -2.1 2,122,305 + AZOBR_RS10155 0.14 -4.5 2,122,306 - AZOBR_RS10155 0.15 -0.7 2,122,306 - AZOBR_RS10155 0.15 -4.0 2,122,549 - AZOBR_RS10155 0.27 -1.8 2,122,737 + AZOBR_RS10155 0.37 -2.5 2,122,737 + AZOBR_RS10155 0.37 -3.3 2,122,738 - AZOBR_RS10155 0.37 -2.4 2,122,974 + AZOBR_RS10155 0.50 -2.7 2,122,974 + AZOBR_RS10155 0.50 -5.4 2,122,975 - AZOBR_RS10155 0.50 -2.8 2,122,975 - AZOBR_RS10155 0.50 -4.8
Or see this region's nucleotide sequence