Experiment: L-Leucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS02910 and AZOBR_RS02915 are separated by 89 nucleotides AZOBR_RS02915 and AZOBR_RS02920 overlap by 4 nucleotides AZOBR_RS02920 and AZOBR_RS02925 are separated by 7 nucleotides AZOBR_RS02925 and AZOBR_RS02930 are separated by 131 nucleotides
AZOBR_RS02910: AZOBR_RS02910 - phosphoribosyltransferase, at 618,363 to 619,106
_RS02910
AZOBR_RS02915: AZOBR_RS02915 - glutaredoxin, at 619,196 to 619,459
_RS02915
AZOBR_RS02920: AZOBR_RS02920 - amidohydrolase, at 619,456 to 620,292
_RS02920
AZOBR_RS02925: AZOBR_RS02925 - SAM-dependent methyltransferase PhcB, at 620,300 to 620,920
_RS02925
AZOBR_RS02930: AZOBR_RS02930 - hypothetical protein, at 621,052 to 621,579
_RS02930
Position (kb) 619
620
621 Strain fitness (log2 ratio) -2
-1
0
1 at 618.627 kb on + strand, within AZOBR_RS02910 at 618.696 kb on + strand, within AZOBR_RS02910 at 618.696 kb on - strand, within AZOBR_RS02910 at 618.697 kb on - strand at 619.132 kb on + strand at 619.164 kb on + strand at 619.165 kb on - strand at 619.214 kb on + strand at 619.214 kb on + strand at 619.214 kb on + strand at 619.215 kb on - strand at 619.215 kb on - strand at 619.235 kb on + strand, within AZOBR_RS02915 at 619.236 kb on - strand, within AZOBR_RS02915 at 619.281 kb on - strand, within AZOBR_RS02915 at 619.281 kb on - strand, within AZOBR_RS02915 at 619.281 kb on - strand, within AZOBR_RS02915 at 619.298 kb on + strand, within AZOBR_RS02915 at 619.298 kb on + strand, within AZOBR_RS02915 at 619.299 kb on - strand, within AZOBR_RS02915 at 619.759 kb on + strand, within AZOBR_RS02920 at 619.759 kb on + strand, within AZOBR_RS02920 at 619.759 kb on + strand, within AZOBR_RS02920 at 619.759 kb on + strand, within AZOBR_RS02920 at 619.759 kb on + strand, within AZOBR_RS02920 at 619.760 kb on - strand, within AZOBR_RS02920 at 619.760 kb on - strand, within AZOBR_RS02920 at 619.760 kb on - strand, within AZOBR_RS02920 at 619.796 kb on - strand, within AZOBR_RS02920 at 619.796 kb on - strand, within AZOBR_RS02920 at 619.796 kb on - strand, within AZOBR_RS02920 at 619.843 kb on + strand, within AZOBR_RS02920 at 619.844 kb on - strand, within AZOBR_RS02920 at 619.927 kb on + strand, within AZOBR_RS02920 at 619.928 kb on - strand, within AZOBR_RS02920 at 619.945 kb on + strand, within AZOBR_RS02920 at 619.945 kb on + strand, within AZOBR_RS02920 at 619.946 kb on - strand, within AZOBR_RS02920 at 619.946 kb on - strand, within AZOBR_RS02920 at 620.122 kb on + strand, within AZOBR_RS02920 at 620.123 kb on - strand, within AZOBR_RS02920 at 620.123 kb on - strand, within AZOBR_RS02920 at 620.123 kb on - strand, within AZOBR_RS02920 at 620.535 kb on + strand, within AZOBR_RS02925 at 620.536 kb on - strand, within AZOBR_RS02925 at 620.598 kb on + strand, within AZOBR_RS02925 at 620.599 kb on - strand, within AZOBR_RS02925 at 620.599 kb on - strand, within AZOBR_RS02925 at 621.004 kb on + strand at 621.004 kb on + strand at 621.004 kb on + strand at 621.005 kb on - strand at 621.005 kb on - strand at 621.005 kb on - strand at 621.121 kb on + strand, within AZOBR_RS02930 at 621.121 kb on + strand, within AZOBR_RS02930 at 621.122 kb on - strand, within AZOBR_RS02930 at 621.122 kb on - strand, within AZOBR_RS02930
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (C) remove 618,627 + AZOBR_RS02910 0.35 +0.1 618,696 + AZOBR_RS02910 0.45 -1.1 618,696 - AZOBR_RS02910 0.45 +0.1 618,697 - +1.0 619,132 + +0.5 619,164 + +0.8 619,165 - -0.4 619,214 + +0.3 619,214 + +0.3 619,214 + +1.0 619,215 - -0.0 619,215 - -0.9 619,235 + AZOBR_RS02915 0.15 +0.3 619,236 - AZOBR_RS02915 0.15 -0.3 619,281 - AZOBR_RS02915 0.32 -1.6 619,281 - AZOBR_RS02915 0.32 -2.1 619,281 - AZOBR_RS02915 0.32 -0.2 619,298 + AZOBR_RS02915 0.39 -0.2 619,298 + AZOBR_RS02915 0.39 +0.2 619,299 - AZOBR_RS02915 0.39 -0.3 619,759 + AZOBR_RS02920 0.36 +0.5 619,759 + AZOBR_RS02920 0.36 +0.6 619,759 + AZOBR_RS02920 0.36 +0.5 619,759 + AZOBR_RS02920 0.36 +0.9 619,759 + AZOBR_RS02920 0.36 -0.5 619,760 - AZOBR_RS02920 0.36 -0.0 619,760 - AZOBR_RS02920 0.36 +0.7 619,760 - AZOBR_RS02920 0.36 +0.7 619,796 - AZOBR_RS02920 0.41 -0.3 619,796 - AZOBR_RS02920 0.41 +0.1 619,796 - AZOBR_RS02920 0.41 +0.2 619,843 + AZOBR_RS02920 0.46 +1.3 619,844 - AZOBR_RS02920 0.46 -0.2 619,927 + AZOBR_RS02920 0.56 +0.8 619,928 - AZOBR_RS02920 0.56 -0.5 619,945 + AZOBR_RS02920 0.58 +0.1 619,945 + AZOBR_RS02920 0.58 -0.1 619,946 - AZOBR_RS02920 0.59 +0.2 619,946 - AZOBR_RS02920 0.59 +0.1 620,122 + AZOBR_RS02920 0.80 +1.3 620,123 - AZOBR_RS02920 0.80 +0.3 620,123 - AZOBR_RS02920 0.80 +0.3 620,123 - AZOBR_RS02920 0.80 -0.8 620,535 + AZOBR_RS02925 0.38 -0.3 620,536 - AZOBR_RS02925 0.38 +0.2 620,598 + AZOBR_RS02925 0.48 -0.2 620,599 - AZOBR_RS02925 0.48 -0.4 620,599 - AZOBR_RS02925 0.48 -0.2 621,004 + +0.1 621,004 + +0.1 621,004 + +1.5 621,005 - -0.4 621,005 - -0.7 621,005 - +0.3 621,121 + AZOBR_RS02930 0.13 -0.3 621,121 + AZOBR_RS02930 0.13 +0.1 621,122 - AZOBR_RS02930 0.13 -0.2 621,122 - AZOBR_RS02930 0.13 +1.1
Or see this region's nucleotide sequence